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Groups > linux.debian.maint.python > #10417
| From | Peter Cock <p.j.a.cock@googlemail.com> |
|---|---|
| Newsgroups | linux.debian.maint.python |
| Subject | Re: Strange encoding problem in setup.py of biopython 1.71 |
| Date | 2018-04-13 13:20 +0200 |
| Message-ID | <vE4Uh-2Wo-1@gated-at.bofh.it> (permalink) |
| References | (2 earlier) <vBeds-5Ip-17@gated-at.bofh.it> <vBen8-5LS-7@gated-at.bofh.it> <vBeZQ-6hA-11@gated-at.bofh.it> <vBtPb-7Uw-5@gated-at.bofh.it> <vBw0G-O7-7@gated-at.bofh.it> |
| Organization | linux.* mail to news gateway |
I ended up doing something similar to catch any future problematic characters: https://github.com/biopython/biopython/pull/1607 Peter On Fri, Apr 6, 2018 at 10:36 AM, Peter Cock <p.j.a.cock@googlemail.com> wrote: > Thanks Andreas, > > Piotr, I think your fix would be worth including in Biopython. > > Do you want to submit this as a pull request, or give me > permission to do so by email? > > We'd need you to agree to both the Biopython License Agreement > and the 3-clause BSD licence, and say if you'd like to be > acknowledged by name or not. > > Regards, > > Peter > > On Fri, Apr 6, 2018 at 8:16 AM, Andreas Tille <tille@debian.org> wrote: >> Hi Peter, >> >> On Thu, Apr 05, 2018 at 04:19:50PM +0100, Peter Cock wrote: >>> >>> https://github.com/biopython/biopython/commit/6421d365a511c0de71748737ba6e1cd8518658ac >>> >>> Can you pull in that commit as a patch for the Biopython 1.71 package? >> >> Thanks. I'm using this as patch. I can confirm that this works now >> (I'm using the other patch suggested here[1] in addition to deal with >> potential other encoding issues. >> >> I'll upload soon (I had some other issues with the packaging which are >> not related). >> >> Kind regards >> >> Andreas. >> >> >> [1] https://lists.debian.org/debian-python/2018/04/msg00023.html >> >> -- >> http://fam-tille.de
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Strange encoding problem in setup.py of biopython 1.71 Andreas Tille <andreas@an3as.eu> - 2018-04-05 16:20 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Piotr Ożarowski <piotr@debian.org> - 2018-04-05 16:40 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Andreas Tille <andreas@an3as.eu> - 2018-04-05 16:40 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Klaus Zimmermann <klaus_zimmermann@gmx.de> - 2018-04-05 16:50 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Peter Cock <p.j.a.cock@googlemail.com> - 2018-04-05 17:30 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Andreas Tille <tille@debian.org> - 2018-04-06 09:20 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Peter Cock <p.j.a.cock@googlemail.com> - 2018-04-06 11:40 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Piotr Ożarowski <piotr@debian.org> - 2018-04-07 00:00 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Peter Cock <p.j.a.cock@googlemail.com> - 2018-04-13 13:20 +0200
Re: Strange encoding problem in setup.py of biopython 1.71 Olivier Sallou <olivier.sallou@irisa.fr> - 2018-04-05 16:50 +0200
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