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Groups > linux.debian.bugs.dist > #1070729

Bug#991919: transition: r-api-bioc-3.13

From Andreas Tille <andreas@an3as.eu>
Newsgroups linux.debian.bugs.dist, linux.debian.devel.release
Subject Bug#991919: transition: r-api-bioc-3.13
Date 2021-09-11 09:10 +0200
Message-ID <CW5jb-7YH-5@gated-at.bofh.it> (permalink)
References <CILii-3Fz-3@gated-at.bofh.it> <CV6AG-38S-3@gated-at.bofh.it> <CILii-3Fz-3@gated-at.bofh.it> <CV6AG-38S-3@gated-at.bofh.it>
Organization linux.* mail to news gateway

Cross-posted to 2 groups.

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Hi,

the blockers mentioned below are done now.  Those who have some
spare time might like to continue with the transition.  I will
not contribute relevant things until Tuesday.

There is one thing I would love to be solved soon:  I just cheated
with the test suite of biomformat in this patch:

   https://salsa.debian.org/r-pkg-team/r-bioc-biomformat/-/blob/master/debian/patches/fixme_disable_test_for_the_moment.patch

I would love if somebody could find a fix - may be by discussing
with upstream.

Kind regards

        Andreas.

On Wed, Sep 08, 2021 at 04:15:28PM +0200, Andreas Tille wrote:
> Hi,
> 
> I'd like to give a short status update here.
> I have uploaded several r-bioc-* packages.  Currently I'm facing two
> blockers
> 
>   * libhdf5-dev needs an update which can be expected soon[1]
>     thanks to Gilles Filippini
>   + r-bioc-rtracklayer needs r-bioc-biocio and r-cran-restfulr
>     which are both in new.  I've pinged #debian-ftp on IRC about
>     this
> 
> Most (probably all) packages listed in the transition tracker
> are affected.  I added the actual issue to d/changelog of those
> packages I touched.
> 
> I'll be unable to do anything about this from 11.-13. September.
> 
> Kind regards
> 
>        Andreas.
> 
> 
> [1] https://lists.debian.org/debian-r/2021/09/msg00037.html
> 
> -- 
> http://fam-tille.de
> 
> 

-- 
http://fam-tille.de

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Thread

Bug#991919: transition: r-api-bioc-3.13 Andreas Tille <tille@debian.org> - 2021-09-08 16:20 +0200
  Bug#991919: transition: r-api-bioc-3.13 Andreas Tille <andreas@an3as.eu> - 2021-09-11 09:10 +0200
    Bug#991919: transition: r-api-bioc-3.13 Nilesh Patra <nilesh@nileshpatra.info> - 2021-09-11 20:00 +0200
      Bug#991919: transition: r-api-bioc-3.13 Andreas Tille <andreas@an3as.eu> - 2021-09-12 08:30 +0200

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