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Help for Python mock test suite needed (Was: Any help with problem of srst2 new versions tests suite failing to call bowtie2)

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Hi,

I've got no help on the Debian Med packaging list.  Is there any hint
how I could track down a test Python suite issue what exact command
was called and failed?

Thanks for any hint

      Andreas.

On Tue, Aug 09, 2016 at 11:32:40PM +0200, Andreas Tille wrote:
> Hi,
> 
> I tried to update srst2[1] package to new upstream version.
> Unfortunately its runtime test produces failures when calling bowtie2.  
> I just added some naive debugging code writing the actual system call
> to a file - but this has not lead to a final solution even if I think
> the invalid option -foo was wrong.
> 
> Any more complete hint from a possibly bowtie2 user would be helpful
> 
>      Andreas.
> 
> 
> [1] svn://anonscm.debian.org/debian-med/trunk/packages/srst2/trunk/
> 
> -- 
> http://fam-tille.de
> 
> _______________________________________________
> Debian-med-packaging mailing list
> Debian-med-packaging@lists.alioth.debian.org
> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-packaging
> 

-- 
http://fam-tille.de

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Thread

Help for Python mock test suite needed (Was: Any help with problem  of srst2 new versions tests suite failing to call bowtie2) Andreas Tille <andreas@an3as.eu> - 2016-08-13 08:50 +0200
  Re: Help for Python mock test suite needed (Was: Any help with problem of srst2 new versions tests suite failing to call bowtie2) Scott Kitterman <debian@kitterman.com> - 2016-08-13 18:50 +0200
    Re: Help for Python mock test suite needed (Was: Any help with  problem of srst2 new versions tests suite failing to call bowtie2) Andreas Tille <andreas@an3as.eu> - 2016-08-14 00:30 +0200
      Re: Help for Python mock test suite needed Ben Finney <ben+debian@benfinney.id.au> - 2016-08-14 02:50 +0200
        Re: Help for Python mock test suite needed Andreas Tille <andreas@an3as.eu> - 2016-08-14 08:20 +0200
          Re: Help for Python mock test suite needed Ben Finney <ben+debian@benfinney.id.au> - 2016-08-14 21:10 +0200
            Re: Help for Python mock test suite needed Andreas Tille <andreas@an3as.eu> - 2016-08-15 12:00 +0200
              Re: Help for Python mock test suite needed Ben Finney <ben+debian@benfinney.id.au> - 2016-08-15 22:30 +0200
                Re: Help for Python mock test suite needed Andreas Tille <andreas@an3as.eu> - 2016-08-17 14:00 +0200
                Re: Help for Python mock test suite needed Barry Warsaw <barry@debian.org> - 2016-08-17 15:30 +0200

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