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Groups > comp.lang.java.programmer > #39545
| From | vjp2.at@at.BioStrategist.dot.dot.com |
|---|---|
| Newsgroups | comp.lang.java.programmer |
| Subject | Re: Java Jython RDKit, some progress, still confused |
| Date | 2020-07-08 13:40 +0000 |
| Organization | Samani Marions Panyaught NYC-11357-3436-287-USA |
| Message-ID | <re4icd$t1t$1@reader1.panix.com> (permalink) |
| References | (3 earlier) <re1s6h$g96$1@dont-email.me> <re2dij$5l1$1@reader1.panix.com> <re2i48$sfr$1@dont-email.me> <re2ksp$aqk$1@reader1.panix.com> <re4asg$jlv$1@reader1.panix.com> |
YOu are not going to believe this (I don't) but this runs:
the -jar wasn't part of their instructions but they had : jython after the
jython jar, which I removed.
Now, I ran the initial statements and I got no complaints, but I also don't
have any clue if it actually works
from org.RDKit import *
from java import lang
lang.System.loadLibrary('GraphMolWrap')
m = RWMol.MolFromSmiles('c1ccccc1')
m.getNumAtoms()
Each line just returns the jython >>> prompt. But I'm relieved.
For now.
Many thanks to all.
@echo off
SET RD_HOME=.
SET JAVA_HOME=..\CommonFiles\JAVA
SET JAVA_COMMAND=%JAVA_HOME%\bin\java.exe
SET LOCAL_CLASSPATH=%RD_HOME%\rdkit-masterCode\JavaWrappers\gmwrapper\org.RDKit.jar
"%JAVA_COMMAND%" -Xmx256m -classpath "%LOCAL_CLASSPATH%" -jar "%JAVA_HOME%"\bin\jython-standalone-2.5.jar -Djava.library.path="%RD_HOME%"\rdkit-masterCode\JavaWrappers\gmwrapper
:END
- = -
Vasos Panagiotopoulos, Columbia'81+, Reagan, Mozart, Pindus
blog: panix.com/~vjp2/ruminatn.htm - = - web: panix.com/~vjp2/vasos.htm
facebook.com/vasjpan2 - linkedin.com/in/vasjpan02 - biostrategist.com
---{Nothing herein constitutes advice. Everything fully disclaimed.}---
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Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-06-16 15:54 +0000
Re: Java Jython RDKit, some progress, still confused Martin Gregorie <martin@mydomain.invalid> - 2020-06-16 19:54 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-07 12:40 +0000
Re: Java Jython RDKit, some progress, still confused Martin Gregorie <martin@mydomain.invalid> - 2020-07-07 13:09 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-07 18:06 +0000
Re: Java Jython RDKit, some progress, still confused Martin Gregorie <martin@mydomain.invalid> - 2020-07-07 19:23 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-07 20:11 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-08 11:32 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-08 13:40 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-08 15:30 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-08 17:04 +0000
Re: Java Jython RDKit, some progress, still confused "C.D. Altenburg, Ph.D," <cdalten@gmail.com> - 2020-07-08 11:13 -0700
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-08 18:33 +0000
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-07-08 22:19 +0200
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-07-08 22:23 +0200
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-11 19:12 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-12 17:24 +0000
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-07-21 01:46 +0200
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-06-16 22:32 +0200
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-06-16 20:40 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-06-17 15:58 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-06-17 20:43 +0000
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-06-18 16:15 +0200
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-06-18 18:40 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-12 17:42 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-12 18:12 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-13 13:31 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-13 18:34 +0000
Re: Java Jython RDKit, some progress, still confused Eric Sosman <esosman@comcast-dot-net.invalid> - 2020-07-13 16:13 -0400
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-16 16:29 +0000
Re: Java Jython RDKit, some progress, still confused vjp2.at@at.BioStrategist.dot.dot.com - 2020-07-16 16:32 +0000
Re: Java Jython RDKit, some progress, still confused "C.D. Altenburg, Ph.D," <cdalten@gmail.com> - 2020-07-17 08:42 -0700
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-07-21 01:53 +0200
Re: Java Jython RDKit, some progress, still confused Daniele Futtorovic <da.futt.news@laposte-dot-net.invalid> - 2020-07-21 01:55 +0200
Re: Java Jython RDKit, some progress, still confused rahul kumar <lingmaaki@gmail.com> - 2020-09-15 22:41 -0700
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