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Re: Mysterious slow IO on fread() to large buffer on large Dell system

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Melzzzzz <mel@zzzzz.com> wrote:
> On Sat, 16 May 2015 11:41:09 -0700 (PDT)
> Malcolm McLean <malcolm.mclean5@btinternet.com> wrote:
 
(snip)

>> He's got 13GB or so to read.
>> The operation is taking 15 minutes. But the computer runs at 2.4Ghz.
>> So if I'm doing my calculations correctly, each byte is taking 166
>> operations to read. That seems way too high, even if there's a
>> function call for each one.
 
> I have experienced extremely slow memory initialization on first pass
> when disk cache occupies most of ram. Say it's about 20-200 times slower
> then on second initialization pass. Say it could take around minute to
> initialize chunk of 800mb on my machine.
> This issue seems fixed in latest kernel 4.0.3

So, another test would be to fill the malloc()ed space with some value,
then start timing read the data, and stop timing. That separates memory
allocation, especially copy on write, from file reading.

Yes, many systems don't actually make the malloc() memory available
until you actually use it.

-- glen

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Mysterious slow IO on fread() to large buffer on large Dell system mathog <dmathog@gmail.com> - 2015-05-15 18:45 -0700
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Ian Collins <ian-news@hotmail.com> - 2015-05-16 14:09 +1200
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Siri Cruz <chine.bleu@yahoo.com> - 2015-05-15 19:20 -0700
    Re: Mysterious slow IO on fread() to large buffer on large Dell system mathog <dmathog@gmail.com> - 2015-05-15 22:29 -0700
      Re: Mysterious slow IO on fread() to large buffer on large Dell system Siri Cruz <chine.bleu@yahoo.com> - 2015-05-16 08:47 -0700
    Re: Mysterious slow IO on fread() to large buffer on large Dell system Robert Wessel <robertwessel2@yahoo.com> - 2015-05-16 02:11 -0500
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Malcolm McLean <malcolm.mclean5@btinternet.com> - 2015-05-15 19:23 -0700
  Re: Mysterious slow IO on fread() to large buffer on large Dell system glen herrmannsfeldt <gah@ugcs.caltech.edu> - 2015-05-16 05:05 +0000
    Re: Mysterious slow IO on fread() to large buffer on large Dell system Melzzzzz <mel@zzzzz.com> - 2015-05-16 07:20 +0200
    Re: Mysterious slow IO on fread() to large buffer on large Dell system mathog <dmathog@gmail.com> - 2015-05-15 22:27 -0700
      Re: Mysterious slow IO on fread() to large buffer on large Dell system Melzzzzz <mel@zzzzz.com> - 2015-05-16 07:59 +0200
      Re: Mysterious slow IO on fread() to large buffer on large Dell system Ian Collins <ian-news@hotmail.com> - 2015-05-16 18:31 +1200
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Lew Pitcher <lew.pitcher@digitalfreehold.ca> - 2015-05-16 10:57 -0400
    Re: Mysterious slow IO on fread() to large buffer on large Dell system Joe Pfeiffer <pfeiffer@cs.nmsu.edu> - 2015-05-16 10:51 -0600
    Re: Mysterious slow IO on fread() to large buffer on large Dell system Malcolm McLean <malcolm.mclean5@btinternet.com> - 2015-05-16 11:41 -0700
      Re: Mysterious slow IO on fread() to large buffer on large Dell system Melzzzzz <mel@zzzzz.com> - 2015-05-16 21:01 +0200
        Re: Mysterious slow IO on fread() to large buffer on large Dell system glen herrmannsfeldt <gah@ugcs.caltech.edu> - 2015-05-16 19:37 +0000
          Re: Mysterious slow IO on fread() to large buffer on large Dell system Noob <root@127.0.0.1> - 2015-05-16 22:14 +0200
    Re: Mysterious slow IO on fread() to large buffer on large Dell system gamo <gamo@telecable.es> - 2015-05-17 12:36 +0200
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Paul <nospam@needed.com> - 2015-05-16 11:29 -0400
  Re: Mysterious slow IO on fread() to large buffer on large Dell system mathog <dmathog@gmail.com> - 2015-05-16 10:50 -0700
    Re: Mysterious slow IO on fread() to large buffer on large Dell system Johann Klammer <klammerj@NOSPAM.a1.net> - 2015-05-17 01:43 +0200
  Re: Mysterious slow IO on fread() to large buffer on large Dell system Stephen Sprunk <stephen@sprunk.org> - 2015-05-16 16:40 -0500
  Re: Mysterious slow IO on fread() to large buffer on large Dell system mathog <dmathog@gmail.com> - 2015-05-26 09:58 -0700

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