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Groups > linux.debian.bugs.dist > #1312406

Bug#1134352: Bioconductor and HDF5 transition clash

From Charles Plessy <plessy@debian.org>
Newsgroups linux.debian.bugs.dist, linux.debian.devel.release
Subject Bug#1134352: Bioconductor and HDF5 transition clash
Date 2026-10-08 13:40 +0200
Message-ID <NLUDD-4g7F-5@gated-at.bofh.it> (permalink)
References (3 earlier) <NzplT-f2hF-1@gated-at.bofh.it> <NBeml-g3hO-3@gated-at.bofh.it> <NLCno-46Em-5@gated-at.bofh.it> <MLnAd-gfjv-1@gated-at.bofh.it> <NLCno-46Em-5@gated-at.bofh.it>
Organization linux.* mail to news gateway

Cross-posted to 2 groups.

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Le Wed, Oct 07, 2026 at 03:56:54PM +0000, Graham Inggs a écrit :
>
>Please upload r-bioc-biocgenerics dropping 'skip-not-installable' in
>the autopkgtests, then let's consider this transition done and
>packages can migrate as soon as their autopkgtests are green.

Hi Graham,

I removed skip-not-installable in this package and every other one that
I uploaded, and it is now in unstable.

charles-plessy@grsu-plessy-xps:~/Debian$ rmadison r-bioc-biocgenerics | grep unstable
r-bioc-biocgenerics | 0.58.1-2      | buildd-unstable | source, all
r-bioc-biocgenerics | 0.58.1-2      | unstable        | source, all
charles-plessy@grsu-plessy-xps:~/Debian$ dpkg -I r-bioc-biocgenerics_0.58.1-2_all.deb | grep -e Version -e Provides
  Version: 0.58.1-2
  Provides: r-api-bioc-3.23

Have a nice day,

Charles

-- 
Charles Plessy                         Nagahama, Yomitan, Okinawa, Japan
Debian Med packaging team         http://www.debian.org/devel/debian-med
Tooting from work,               https://fediscience.org/@charles_plessy
Tooting from home,                 https://framapiaf.org/@charles_plessy

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Bug#1134352: Bioconductor and HDF5 transition clash Graham Inggs <ginggs@debian.org> - 2026-10-07 18:10 +0200
  Bug#1134352: Bioconductor and HDF5 transition clash Charles Plessy <plessy@debian.org> - 2026-10-08 13:40 +0200

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