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Re: build package xrayutilities - wheel and pip with setuptools

From Carsten Schoenert <c.schoenert@t-online.de>
Newsgroups linux.debian.maint.python
Subject Re: build package xrayutilities - wheel and pip with setuptools
Date 2022-10-30 10:20 +0100
Message-ID <FmcE1-7TY-1@gated-at.bofh.it> (permalink)
References <Fm2bD-16z-3@gated-at.bofh.it> <Fm2Om-1iP-7@gated-at.bofh.it> <Fm37H-1EI-1@gated-at.bofh.it>
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Hello Frederic,

please could you provide next time direct links to the VCS/Tracker of 
your package, that prevents time to search for the correct package on my 
or others people side. Also a speaking subject content is helping me to 
decide if I want to spend time on taking a look, you've choose a very 
generic line. :-)

https://tracker.debian.org/pkg/xrayutilities
https://salsa.debian.org/science-team/python-xrayutilities

Am 30.10.22 um 01:08 schrieb picca:
> Le 2022-10-30 00:39, Scott Kitterman a écrit :
> 
>> Adding  pybuild-plugin-pyproject to build-depends should solve it.  It
>> looks like it is trying to do the new pyproject.toml style build
>> without all the necessary parts in place.
> 
> the package contain a pyproject.toml file and a setup.py one.
> 
> the build system in the pyproject file is setuptools.
> 
> [build-system]
> requires = ["setuptools", "wheel", "numpy"]
> build-backend = "setuptools.build_meta"
> 
> So I imagine that under the hood it use the setup.py file.

No as you have overwritten the default target by a call that is quite 
similar to the original pybuild call.

> now it fails with this error message
> 
> adding 'xrayutilities-1.7.3.dist-info/top_level.txt'
> adding 'xrayutilities-1.7.3.dist-info/RECORD'
> removing build/bdist.linux-x86_64/wheel
> * Building wheel...
> Successfully built xrayutilities-1.7.3-cp310-cp310-linux_x86_64.whl
> I: pybuild plugin_pyproject:118: Unpacking wheel built for python3.10 with "installer" module
> E: pybuild pybuild:379: build: plugin pyproject failed with: File already exists: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_xrayutilities/build/xrayutilities/VERSION
> dh_auto_build: error: pybuild --build -i python{version} -p 3.10 returned exit code 13
> make[1]: *** [debian/rules:20: override_dh_auto_build-arch] Error 25
> 
> 
> this failure seems to come from the indep part
> 
> 
> %:
>           dh $@ --buildsystem=pybuild
> 
> execute_after_dh_auto_clean:
>           rm -rf build
> 
> override_dh_auto_build-arch:
>           dh_auto_build
> 
> override_dh_auto_build-indep: override_dh_auto_build-arch
> ifeq (,$(findstring nodoc, $(DEB_BUILD_OPTIONS)))
>           dh_auto_build -- -s custom --build-args="env
> PYTHONPATH={build_dir} {interpreter} setup.py build_doc"
> endif
> 
> 
> since I make the indep part depends on the arch one, it build the
> package a second time. and this is during this second reconstruction
> that
> it failes.
> 
> it seems that the arch rules does not gard from a second build, and it
> is not indepotent...

Yes, the environment isn't the same for the second call, you'd need to 
ensure that the build directory is clean before starting the second run. 
But I don't see why this construct you've build in d/rules is needed 
that way.

I can build the package basically doing these modifications and by 
adding the additional B-D package Scott did mention. Simply let 
dh_sphinxdoc build the documentation and adding the additional needed 
package dependencies.

> $ git diff
> diff --git a/debian/control b/debian/control
> index 4a702ea..1b746a3 100644
> --- a/debian/control
> +++ b/debian/control
> @@ -10,9 +10,9 @@ Section: science
>  Priority: optional
>  Build-Depends:
>   debhelper-compat (= 13),
> - dh-python,
>   dh-sequence-numpy3,
>   dh-sequence-python3,
> + pybuild-plugin-pyproject,
>   python3-all-dev,
>   python3-h5py,
>   python3-lmfit,
> diff --git a/debian/rules b/debian/rules
> index 54c4cb0..089385d 100755
> --- a/debian/rules
> +++ b/debian/rules
> @@ -4,6 +4,7 @@
>  # Uncomment this to turn on verbose mode.
>  export DH_VERBOSE=1
>  export DEB_BUILD_MAINT_OPTIONS=hardening=+all
> +export DEB_HOST_ARCH?=$(shell dpkg-architecture -qDEB_HOST_ARCH)
>  
>  # copy the tests to the build dir to be able to pass nose
>  export PYBUILD_NAME=xrayutilities
> @@ -11,18 +12,13 @@ export PYBUILD_BEFORE_TEST=cp -r tests {build_dir}; cp -r examples {build_dir};
>  export PYBUILD_AFTER_TEST=rm -rf {build_dir}/tests; rm -rf {build_dir}/xrayutilities/materials/data; rm -rf {build_dir}/examples
>  
>  %:
> -       dh $@ --buildsystem=pybuild
> +       dh $@ --with sphinxdoc --buildsystem=pybuild
>  
> -execute_after_dh_auto_clean:
> -       rm -rf build
> -
> -override_dh_auto_build-arch:
> -       dh_auto_build
> -
> -override_dh_auto_build-indep: override_dh_auto_build-arch
> +override_dh_sphinxdoc:
>  ifeq (,$(findstring nodoc, $(DEB_BUILD_OPTIONS)))
> -       dh_auto_build -- -s custom --build-args="env PYTHONPATH={build_dir} {interpreter} setup.py build_doc"
> +       PYTHONPATH=. python3 -m sphinx -b html -N doc/source $(CURDIR)/debian/python-xrayutilities-doc/usr/share/doc/python-xrayutilities-doc/html
> +       dh_sphinxdoc
>  endif
>  
> -execute_after_dh_installdocs:
> -       dh_installdocs -p python-xrayutilities-doc build/sphinx/html
> +execute_after_dh_auto_clean:
> +       rm -rf build

lintian has some additional remarks any way, I haven't looked further at 
these.

-- 
Regards
Carsten

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wheel and pip with setuptools picca <picca@debian.org> - 2022-10-30 00:10 +0200
  Re: wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-10-30 00:50 +0200
    Re: wheel and pip with setuptools picca <picca@debian.org> - 2022-10-30 01:10 +0200
      Re: build package xrayutilities - wheel and pip with setuptools Carsten Schoenert <c.schoenert@t-online.de> - 2022-10-30 10:20 +0100
        Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-10-31 09:20 +0100
          Re: build package xrayutilities - wheel and pip with setuptools Carsten Schoenert <c.schoenert@t-online.de> - 2022-10-31 18:30 +0100
            Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-10-31 18:40 +0100
            Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-01 16:40 +0100
              Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-11-01 18:50 +0100
                Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-11-01 19:50 +0100
                Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-11-01 20:00 +0100
                Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-11-01 20:20 +0100
                Re: build package xrayutilities - wheel and pip with setuptools Scott Kitterman <debian@kitterman.com> - 2022-11-01 20:40 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-02 09:20 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-02 09:30 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-02 10:10 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-02 13:10 +0100
                Re: build package xrayutilities - wheel and pip with setuptools Jerome Kieffer <Jerome.Kieffer@esrf.fr> - 2022-11-02 10:20 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-01 20:50 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-01 20:30 +0100
                Re: build package xrayutilities - wheel and pip with setuptools PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr> - 2022-11-01 20:10 +0100

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