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Re: Problem Installing DiscoveryStudio2019 in Buster

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  Re: Problem Installing DiscoveryStudio2019 in Buster Erwan David <erwan@rail.eu.org> - 2019-07-08 20:50 +0200
    Re: Problem Installing DiscoveryStudio2019 in Buster Greg Wooledge <wooledg@eeg.ccf.org> - 2019-07-08 21:00 +0200
    Re: Problem Installing DiscoveryStudio2019 in Buster Sven Joachim <svenjoac@gmx.de> - 2019-07-08 21:00 +0200
    Re: Problem Installing DiscoveryStudio2019 in Buster "Stephen P. Molnar" <s.molnar@sbcglobal.net> - 2019-07-08 21:10 +0200
      Re: Problem Installing DiscoveryStudio2019 in Buster Curt <curty@free.fr> - 2019-07-09 11:20 +0200
        Re: Problem Installing DiscoveryStudio2019 in Buster "Stephen P. Molnar" <s.molnar@sbcglobal.net> - 2019-07-09 13:30 +0200
          Re: Problem Installing DiscoveryStudio2019 in Buster Curt <curty@free.fr> - 2019-07-09 14:30 +0200

#211029 — Re: Problem Installing DiscoveryStudio2019 in Buster

Le 08/07/2019 à 20:40, Stephen P. Molnar a écrit :
> I have just installed Buster and have encountereda  a problem
> attempting the installation of biovia_2019_.ds2019client.bin:
>
> comp@AbNormal:~/Downloads/DiscoveryStudio$ ./biovia_2019.ds2019client.bin
> Verifying archive integrity...  100%   All good.
> Uncompressing 'DS Client and extracting files, please wait ......' 100%
> ./install_DSClient.sh: 49: ./install_DSClient.sh: [[: not found
> ./install_DSClient.sh: 70: ./install_DSClient.sh: Syntax error:
> redirection unexpected
> Press Return to close this window...
>
> And not too surprising, Press Return did close the window.
>
> Anyone have any ideas as to a solution?
>
> Thanks in advance.
>
[[ is a bash built-in not defined in dash.

It might be that the .bin file is a bash script presented as a sh one.

If file biovia_2019_.ds2019client.bin resturns "/bin/sh script" that
would be almost sure. In that case try

bash ./biovia_2019.ds2019client.bin to force bash interpreter

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#211032

On Mon, Jul 08, 2019 at 08:46:30PM +0200, Erwan David wrote:
> bash ./biovia_2019.ds2019client.bin to force bash interpreter

That won't work, because...

> Le 08/07/2019 à 20:40, Stephen P. Molnar a écrit :
> > comp@AbNormal:~/Downloads/DiscoveryStudio$ ./biovia_2019.ds2019client.bin
> > Verifying archive integrity...  100%   All good.
> > Uncompressing 'DS Client and extracting files, please wait ......' 100%
> > ./install_DSClient.sh: 49: ./install_DSClient.sh: [[: not found
> > ./install_DSClient.sh: 70: ./install_DSClient.sh: Syntax error:
> > redirection unexpected
> > Press Return to close this window...

It's not the ./biovia_2019.ds2019client.bin script that's actually
got these errors in it.  It's the "./install_DSClient.sh" script, which
I'm guessing is part of the payload that's extracted and/or downloaded
by ./biovia_2019.ds2019client.bin.

It may be impossible to specify that ./install_DSClient.sh needs to be
run by bash, due to internal checksums, or glob knows what else.  So,
your safest option is to reconstruct the environment in which this
"biovia" thing is known to work, which probably means /bin/sh -> bash.

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#211034

On 2019-07-08 20:46 +0200, Erwan David wrote:

> Le 08/07/2019 à 20:40, Stephen P. Molnar a écrit :
>> I have just installed Buster and have encountereda  a problem
>> attempting the installation of biovia_2019_.ds2019client.bin:
>>
>> comp@AbNormal:~/Downloads/DiscoveryStudio$ ./biovia_2019.ds2019client.bin
>> Verifying archive integrity...  100%   All good.
>> Uncompressing 'DS Client and extracting files, please wait ......' 100%
>> ./install_DSClient.sh: 49: ./install_DSClient.sh: [[: not found
>> ./install_DSClient.sh: 70: ./install_DSClient.sh: Syntax error:
>> redirection unexpected
>> Press Return to close this window...
>>
>> And not too surprising, Press Return did close the window.
>>
>> Anyone have any ideas as to a solution?
>>
>> Thanks in advance.
>>
> [[ is a bash built-in not defined in dash.
>
> It might be that the .bin file is a bash script presented as a sh one.

Probably not, since the file which complains is called
"/install_DSClient.sh".  The .bin file appears to be a self-extracting
archive which then runs the shell script.

> If file biovia_2019_.ds2019client.bin resturns "/bin/sh script" that
> would be almost sure. In that case try
>
> bash ./biovia_2019.ds2019client.bin to force bash interpreter

Most likely that will not work.  To use bash as /bin/sh for the biova
installer, switchsh[1] could be used instead.

Cheers,
       Sven


1. https://packages.debian.org/buster/switchsh

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#211037

On 07/08/2019 02:46 PM, Erwan David wrote:
> Le 08/07/2019 ?? 20:40, Stephen P. Molnar a ??crit :
>> I have just installed Buster and have encountereda  a problem
>> attempting the installation of biovia_2019_.ds2019client.bin:
>>
>> comp@AbNormal:~/Downloads/DiscoveryStudio$ ./biovia_2019.ds2019client.bin
>> Verifying archive integrity...  100%   All good.
>> Uncompressing 'DS Client and extracting files, please wait ......' 100%
>> ./install_DSClient.sh: 49: ./install_DSClient.sh: [[: not found
>> ./install_DSClient.sh: 70: ./install_DSClient.sh: Syntax error:
>> redirection unexpected
>> Press Return to close this window...
>>
>> And not too surprising, Press Return did close the window.
>>
>> Anyone have any ideas as to a solution?
>>
>> Thanks in advance.
>>
> [[ is a bash built-in not defined in dash.
>
> It might be that the .bin file is a bash script presented as a sh one.
>
> If file biovia_2019_.ds2019client.bin resturns "/bin/sh script" that
> would be almost sure. In that case try
>
> bash ./biovia_2019.ds2019client.bin to force bash interpreter
>
>
>
Good idea, but it didn't work!  Got the same result, it just took longer.

-- 
Stephen P. Molnar, Ph.D.            Life is a fuzzy set
http://www.Molecular-Modeling.net   Multivariate and stochastic
614.312.7528 (c)
Skype:  smolnar1

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#211071

On 2019-07-08, Stephen P. Molnar <s.molnar@sbcglobal.net> wrote:
>
> Good idea, but it didn't work!  Got the same result, it just took longer.
>

https://forums.linuxmint.com/viewtopic.php?t=293074

Fastidious (27 steps!) but maybe effective.

Shorter:

bash DS2019Client.bin --keep
cd client/
sed s/"echoe"/"echo -e"/g install_DSClient.sh > install_DSClient_e.sh
bash install_DSClient_e.sh

(for the License Pack):
cd lp_installer/
bash lp_setup_linux.sh --keep
cd lpbuild/
sed s/"echoe"/"echo -e"/g install_lp.sh > install_lp_e.sh


-- 
"These findings demonstrate that under appropriate conditions the isolated,
intact large mammalian brain possesses an underappreciated capacity for
restoration of microcirculation and molecular and cellular activity after a
prolonged post-mortem interval." From a recent article in *Nature*. Holy shit. 

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#211074

[Multipart message — attachments visible in raw view] — view raw

On 07/09/2019 05:15 AM, Curt wrote:
> On 2019-07-08, Stephen P. Molnar <s.molnar@sbcglobal.net> wrote:
>> Good idea, but it didn't work!  Got the same result, it just took longer.
>>
> https://forums.linuxmint.com/viewtopic.php?t=293074
>
> Fastidious (27 steps!) but maybe effective.
>
> Shorter:
>
> bash DS2019Client.bin --keep
> cd client/
> sed s/"echoe"/"echo -e"/g install_DSClient.sh > install_DSClient_e.sh
> bash install_DSClient_e.sh
>
> (for the License Pack):
> cd lp_installer/
> bash lp_setup_linux.sh --keep
> cd lpbuild/
> sed s/"echoe"/"echo -e"/g install_lp.sh > install_lp_e.sh
>
>

I followed the Linux Mint Forum directions an got the results shown in 
the attached DiscoveryStudio2019.run.log (attached).

Next step(s), please?

Thanks in advance.

-- 
Stephen P. Molnar, Ph.D.            Life is a fuzzy set
http://www.Molecular-Modeling.net   Multivariate and stochastic
614.312.7528 (c)
Skype:  smolnar1

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#211075

On 2019-07-09, Stephen P. Molnar <s.molnar@sbcglobal.net> wrote:
>
> I followed the Linux Mint Forum directions an got the results shown in 
> the attached DiscoveryStudio2019.run.log (attached).

> Next step(s), please?

Thanks for the vote confidence, but it's probably misplaced.

;-)

So, I guess, it doesn't run, and all you get is the log? All the log
tells me of note (me not really speaking shell) is that the "License Pack
location (%LP_LOCATION%) is not a valid location" (I *think* that's
what it's telling me).

I did note at the Mint Forum link I gave you the following: "Before
installing DSV, consult the System Requirements on the Biovia webpage,
and install as many of the recommended libraries as you can. Because
Biovia only supports RHEL, CentOS, and SUSE, you will need to translate
the library names from rpm to deb nomenclature," which looks to be an
arduous task.

Anyway, did you run

/home/comp/Apps/Biovia2019/DiscoveryStudio2019/bin/../bin/config_lp_location <location of LicensePack>

(or is that not really the problem)?

> Thanks in advance.
>


-- 
"These findings demonstrate that under appropriate conditions the isolated,
intact large mammalian brain possesses an underappreciated capacity for
restoration of microcirculation and molecular and cellular activity after a
prolonged post-mortem interval." From a recent article in *Nature*. Holy shit. 

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