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Groups > linux.debian.maint.python > #13780 > unrolled thread

[help] pymol: Deprecation warning during startup

Started byAndreas Tille <andreas@an3as.eu>
First post2021-12-14 21:20 +0100
Last post2021-12-15 00:10 +0100
Articles 3 — 3 participants

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  [help] pymol: Deprecation warning during startup Andreas Tille <andreas@an3as.eu> - 2021-12-14 21:20 +0100
    Re: [help] pymol: Deprecation warning during startup Andrey Rahmatullin <wrar@debian.org> - 2021-12-14 23:20 +0100
    Re: [Debichem-devel] [help] pymol: Deprecation warning during  startup Daniel Leidert <dleidert@debian.org> - 2021-12-15 00:10 +0100

#13780 — [help] pymol: Deprecation warning during startup

FromAndreas Tille <andreas@an3as.eu>
Date2021-12-14 21:20 +0100
Subject[help] pymol: Deprecation warning during startup
Message-ID<Dumrg-6qZ-3@gated-at.bofh.it>
Hi,

I think I've fixed the issue[1] and it works nicely at command line.  Unfortunately
Salsa-CI[2] shows a new issue

   AttributeError: module 'importlib' has no attribute 'util'

which I do not understand at all since at command line there is the attribute 'util'.

Any hint would be welcome
    Andreas.


[1] https://salsa.debian.org/debichem-team/pymol/-/commit/66b5875cbc000870f3661c66a4578d4c58968446
[2] https://salsa.debian.org/debichem-team/pymol/-/jobs/2273661

-- 
http://fam-tille.de

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#13782

FromAndrey Rahmatullin <wrar@debian.org>
Date2021-12-14 23:20 +0100
Message-ID<Duojn-7zh-1@gated-at.bofh.it>
In reply to#13780

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On Tue, Dec 14, 2021 at 09:17:31PM +0100, Andreas Tille wrote:
> I think I've fixed the issue[1] and it works nicely at command line.  Unfortunately
> Salsa-CI[2] shows a new issue
> 
>    AttributeError: module 'importlib' has no attribute 'util'
You should explicitly import modules that you are using, such as
`importlib.util`.

> which I do not understand at all since at command line there is the attribute 'util'.
As you can see in sys.modules, some modules are imported by default in
some circumstabces. You shouldn't depend on that.

-- 
WBR, wRAR

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#13784 — Re: [Debichem-devel] [help] pymol: Deprecation warning during startup

FromDaniel Leidert <dleidert@debian.org>
Date2021-12-15 00:10 +0100
SubjectRe: [Debichem-devel] [help] pymol: Deprecation warning during startup
Message-ID<Dup5L-85n-3@gated-at.bofh.it>
In reply to#13780

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Am Dienstag, dem 14.12.2021 um 21:17 +0100 schrieb Andreas Tille:
> Hi,
> 
> I think I've fixed the issue[1] and it works nicely at command line. 
> Unfortunately
> Salsa-CI[2] shows a new issue
> 
>    AttributeError: module 'importlib' has no attribute 'util'
> 
> which I do not understand at all since at command line there is the attribute
> 'util'.

importlib/util.py is part of libpython3.x-minimal, and while libpython3.10-
minimal gets installed, libpython3.9-minimal is not and it seems, python3.9 is
the default. So technically the error would be correct.

As I said in my other mail, maybe use

import importlib.util; ...

Not sure of that fixes your dependencies. You have to depend on the right
libpython3.x-minimal, it seems.

HTH Daniel
-- 
Regards,
Daniel Leidert <dleidert@debian.org> | https://www.wgdd.de/
GPG-Key RSA4096 / BEED4DED5544A4C03E283DC74BCD0567C296D05D
GPG-Key ED25519 / BD3C132D8B3805D1808123AB7ACE00941E338C78

https://www.fiverr.com/dleidert
https://www.patreon.com/join/dleidert

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