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Re: [RFC] python-cobra, python3-sbml5

Cross-posted to 2 groups.

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Hi Nilesh,

On Sat, Apr 04, 2020 at 06:53:55PM +0530, Nilesh Patra wrote:
> 
> >From the logs, in the last message[2] it looks like an import-error for
> '_libsbml' file which corresponds to libsbml (with python3-sbml5 as a
> provide) package. When I dug into looking at libsbml, I noticed that the
> relevant file (libsbml.py) which throws error
> is generated with swig-3.0 by the upstream [3]

I admit I'm absolutely naive about swig - but if libsbml.py is really
autogenerated what about re-generating it with swig-4?

Kind regards

      Andreas.
 
> [1]: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=955656
> 
> [2]: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=955656#10
> 
> [3]:
> https://salsa.debian.org/med-team/libsbml/-/blob/master/src/bindings/python/libsbml.py?expanded=true&viewer=simple
> 
> Thanks and regards
> Nilesh

-- 
http://fam-tille.de

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Thread

[RFC] python-cobra, python3-sbml5 Nilesh Patra <npatra974@gmail.com> - 2020-04-04 15:50 +0200
  Re: [RFC] python-cobra, python3-sbml5 Andrey Rahmatullin <wrar@debian.org> - 2020-04-04 17:30 +0200
  Re: [RFC] python-cobra, python3-sbml5 Andreas Tille <andreas@fam-tille.de> - 2020-04-05 08:40 +0200
    Re: [RFC] python-cobra, python3-sbml5 Nilesh Patra <npatra974@gmail.com> - 2020-04-05 12:30 +0200
      Re: [RFC] python-cobra, python3-sbml5 Andreas Tille <andreas@an3as.eu> - 2020-04-05 12:30 +0200
        Re: [RFC] python-cobra, python3-sbml5 Nilesh Patra <npatra974@gmail.com> - 2020-04-05 13:00 +0200

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