Groups > linux.debian.maint.python > #10491

Re: foo FTBFS with dh-python >= 3.20180313

From	Andreas Tille <andreas@an3as.eu>
Newsgroups	linux.debian.maint.python, linux.debian.bugs.dist
Subject	Re: foo FTBFS with dh-python >= 3.20180313
Date	2018-04-30 23:20 +0200
Message-ID	<vKonf-1iy-1@gated-at.bofh.it> (permalink)
References	(1 earlier) <vIM0G-2LO-1@gated-at.bofh.it> <vKg6l-40c-3@gated-at.bofh.it> <vKhvr-4SV-1@gated-at.bofh.it> <vKlfH-7pM-5@gated-at.bofh.it> <vKlIK-7Ss-3@gated-at.bofh.it>
Organization	linux.* mail to news gateway

Cross-posted to 2 groups.

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On Mon, Apr 30, 2018 at 08:29:13PM +0200, Piotr Ożarowski wrote:
> [Andreas Tille, 2018-04-30]
> > Hmmm, inside pbuilder chroot the files are installed to
> > 
> >   /build/snakemake-4.8.0/.pybuild/cpython3_3.6_snakemake/build/bin/snakemake
> > 
> > while
> > 
> >   # pybuild --print build_dir --interpreter python3
> >   /build/snakemake-4.8.0/.pybuild/cpython3_3.6/build
> 
> you invoked it outside debian/rules, without --name or PYBUILD_NAME set,
> right?

Yes, that's right.
 
> > I have no idea why since some dh-python version things are different
> > than before but wouldn't it be the best idea to let pybuild set PATH and
> > PYTHONPATH instead of setting it manually by some manual command?
> 
> I meant to fix also debian/rules line 11 (you fixed line 21 only)

I commited my last attemt to Git fixing PATH on both lines.

I get with this d/rules:


...
    raise Exception("snakemake not in PATH. For testing, install snakemake with "
Exception: snakemake not in PATH. For testing, install snakemake with 'pip install -e .'. You should do this in a separate environment (via conda or virtualenv).

----------------------------------------------------------------------
Ran 4 tests in 0.187s

FAILED (errors=1)
E: pybuild pybuild:336: test: plugin distutils failed with: exit code=1: cd /build/snakemake-4.8.0/.pybuild/cpython3_3.6_snakemake/build; python3.6 -m nose tests
dh_auto_test: pybuild --test --test-nose -i python{version} -p 3.6 returned exit code 13
make: *** [debian/rules:17: build] Error 25
dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2
I: copying local configuration
E: Failed autobuilding of package
I: user script /var/cache/pbuilder/build/cow.11501/tmp/hooks/C99_failed_build starting
root:/# echo $PATH
/usr/sbin:/usr/bin:/sbin:/bin


I have no idea why but the PATH does not make it through.

I confirm if I set

   root:/build/snakemake-4.8.0# export PYBUILD_NAME=snakemake
   root:/build/snakemake-4.8.0# pybuild --print build_dir --interpreter python3
   /build/snakemake-4.8.0/.pybuild/cpython3_3.6_snakemake/build

But why does these variables not end up in the chroot?

Kind regards

       Andreas.

-- 
http://fam-tille.de

Thread

Re: foo FTBFS with dh-python >= 3.20180313 Piotr Ożarowski <piotr@debian.org> - 2018-04-26 12:10 +0200
  Re: foo FTBFS with dh-python >= 3.20180313 Andreas Tille <andreas@an3as.eu> - 2018-04-30 14:30 +0200
    Re: foo FTBFS with dh-python >= 3.20180313 Piotr Ożarowski <piotr@debian.org> - 2018-04-30 16:00 +0200
      Re: foo FTBFS with dh-python >= 3.20180313 Andreas Tille <andreas@an3as.eu> - 2018-04-30 20:00 +0200
        Re: foo FTBFS with dh-python >= 3.20180313 Piotr Ożarowski <piotr@debian.org> - 2018-04-30 20:30 +0200
          Re: foo FTBFS with dh-python >= 3.20180313 Andreas Tille <andreas@an3as.eu> - 2018-04-30 23:20 +0200
            How to make sure PATH is set correctly (Was: foo FTBFS with  dh-python >= 3.20180313) Andreas Tille <andreas@an3as.eu> - 2018-05-07 14:10 +0200

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