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Groups > linux.debian.maint.python > #9811

Bug#729956: Python 3 Statsmodels & Pandas

From Diane Trout <diane@ghic.org>
Newsgroups linux.debian.bugs.dist, linux.debian.maint.python
Subject Bug#729956: Python 3 Statsmodels & Pandas
Date 2017-09-16 23:30 +0200
Message-ID <uqsFj-79u-1@gated-at.bofh.it> (permalink)
References (3 earlier) <umP7r-6KN-9@gated-at.bofh.it> <uqsch-6Kl-1@gated-at.bofh.it> <uqsvD-75W-3@gated-at.bofh.it> <mfRYC-5tD-9@gated-at.bofh.it> <uqsvD-75W-3@gated-at.bofh.it>
Organization linux.* mail to news gateway

Cross-posted to 2 groups.

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On Sat, 2017-09-16 at 22:59 +0200, Yuri D'Elia wrote:
> On Sat, Sep 16 2017, Diane Trout wrote:
> > python3-pandas: Pandas is not installable
> > https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875723
> 
> I would have expected the rebuild of python packages affected by the
> fpectl extension with a transition, but it doesn't seem to be the
> case?
> 
> https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874253
> 
> More Breaks where added to {python,python3}-stdlib itself, but there
> are
> still packages which didn't rebuild.

I was assuming it's because there's a cyclic dependency between pandas
and statsmodels (needed for pandas unit tests), and statsmodels was
also broken by the fpectl problem.

https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875805

My solution was to use build-profiles to flag the test dependency with
!nocheck

(The diff of the control file changes, though I forgot to add python3-
statsmodels.)

I have a few rules changes too, but I need to separate the changes into
different commits.

--- a/debian/control
+++ b/debian/control
@@ -3,7 +3,7 @@ Section: python
 Priority: optional
 Maintainer: NeuroDebian Team <team@neuro.debian.net>
 Uploaders: Yaroslav Halchenko <debian@onerussian.com>, Michael Hanke <
michael.hanke@g
mail.com>
-Build-Depends: debhelper (>= 7.0.50),
+Build-Depends: debhelper (>= 10),
                python-all-dev (>= 2.5),
                python-setuptools,
                cython,
@@ -11,12 +11,11 @@ Build-Depends: debhelper (>= 7.0.50),
                python-scipy,
                python-tz,
                python-tables [!m68k !sh4 !x32],
-               python-sphinx (>= 1.0~),
-               python-nbsphinx,
-               python-nose,
-               python-pytest,
+               python-sphinx (>= 1.0~) <!nodoc>,
+               python-nbsphinx <!nodoc>,
+               python-nose <!nocheck>,
+               python-pytest <!nocheck>,
                python-matplotlib [!hurd-i386],
-               python-tk,
                python-openpyxl, python-xlwt, python-xlrd,
                python-bs4,
                python-html5lib,
@@ -29,11 +28,10 @@ Build-Depends: debhelper (>= 7.0.50),
                python3-numpy (>= 1:1.7~), python3-dateutil,
                python3-scipy,
                python3-tz,
-               python3-sphinx (>= 1.0~),
-               python3-nose,
-               python3-pytest,
+               python3-sphinx (>= 1.0~) <!nodoc>,
+               python3-nose <!nocheck>,
+               python3-pytest <!nocheck>,
                python3-matplotlib [!hurd-i386]| python-matplotlib (<<
1.2.0~) [!hurd-i386],
-               python3-tk,
                python3-bs4,
                python3-six,
                python3-lxml,
@@ -42,15 +40,15 @@ Build-Depends: debhelper (>= 7.0.50),
                xvfb, xauth, xclip,
 Build-Depends-Indep:
  ipython (>= 0.12) | ipython2x | ipython1x,
- python-statsmodels [!arm64 !ppc64el !sparc64 !mips64el !ppc64
!sparc64 !sh4],
+ python-statsmodels [!arm64 !ppc64el !sparc64 !mips64el !ppc64
!sparc64 !sh4] <!nocheck>,

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Thread

Bug#729956: Forwarded upstream Andreas Tille <tille@debian.org> - 2017-09-06 22:30 +0200
  Bug#729956: Forwarded upstream Yuri D'Elia <wavexx@thregr.org> - 2017-09-06 22:40 +0200
    Bug#729956: Forwarded upstream Andreas Tille <tille@debian.org> - 2017-09-06 23:00 +0200
      Bug#729956: git-dpm (was Re: Bug#729956: Forwarded upstream) Yuri D'Elia <wavexx@thregr.org> - 2017-09-06 23:20 +0200
        Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Scott Kitterman <debian@kitterman.com> - 2017-09-07 00:50 +0200
          Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Brian May <brian@linuxpenguins.xyz> - 2017-09-07 01:20 +0200
            Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Yuri D'Elia <wavexx@thregr.org> - 2017-09-08 00:50 +0200
          Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Brian May <brian@linuxpenguins.xyz> - 2017-09-07 01:30 +0200
            Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Scott Kitterman <debian@kitterman.com> - 2017-09-07 07:00 +0200
              Re: git-dpm (was Re: Bug#729956: Forwarded upstream) Brian May <brian@linuxpenguins.xyz> - 2017-09-07 07:30 +0200
  Bug#729956: Forwarded upstream Diane Trout <diane@ghic.org> - 2017-09-07 00:30 +0200
    Bug#729956: Forwarded upstream Matthias Klose <doko@debian.org> - 2017-09-07 06:20 +0200
    Bug#729956: Forwarded upstream Andreas Tille <andreas@an3as.eu> - 2017-09-07 06:30 +0200
      Bug#729956: Forwarded upstream Diane Trout <diane@ghic.org> - 2017-09-07 06:40 +0200
        Bug#729956: Forwarded upstream Andreas Tille <andreas@an3as.eu> - 2017-09-07 08:40 +0200
          Bug#729956: Forwarded upstream Diane Trout <diane@ghic.org> - 2017-09-08 08:40 +0200
  Bug#729956: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-16 22:50 +0200
    Bug#729956: Python 3 Statsmodels & Pandas Yuri D'Elia <wavexx@thregr.org> - 2017-09-16 23:10 +0200
      Bug#729956: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-16 23:30 +0200
        Bug#729956: Python 3 Statsmodels & Pandas Yuri D'Elia <wavexx@thregr.org> - 2017-09-17 00:00 +0200
          Re: skimage (was: Re: Bug#729956: Python 3 Statsmodels & Pandas) Yaroslav Halchenko <yoh@debian.org> - 2017-10-13 00:10 +0200
          skimage (was: Re: Bug#729956: Python 3 Statsmodels & Pandas) Yuri D'Elia <wavexx@thregr.org> - 2017-10-13 00:40 +0200
        Re: Python 3 Statsmodels & Pandas Stuart Prescott <stuart@debian.org> - 2017-09-18 04:00 +0200
          Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-18 07:20 +0200
            Re: Python 3 Statsmodels & Pandas Stuart Prescott <stuart@debian.org> - 2017-09-18 10:10 +0200
              Re: Python 3 Statsmodels & Pandas Gordon Ball <gordon@chronitis.net> - 2017-09-18 19:30 +0200
                Re: Python 3 Statsmodels & Pandas Matthias Klose <doko@debian.org> - 2017-09-18 21:30 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-19 06:50 +0200
              Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-21 16:30 +0200
                Re: Python 3 Statsmodels & Pandas Ghislain Vaillant <ghisvail@gmail.com> - 2017-09-21 17:00 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-21 23:50 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-22 00:10 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-22 04:30 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-22 07:20 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-24 20:30 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@fam-tille.de> - 2017-09-25 00:10 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-25 01:00 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-25 01:20 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-25 08:50 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-25 09:50 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-25 19:40 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-25 19:50 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-26 06:40 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@fam-tille.de> - 2017-09-26 09:20 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-26 20:40 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-26 22:50 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-26 23:00 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-26 23:50 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@fam-tille.de> - 2017-09-27 08:20 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-27 07:50 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@fam-tille.de> - 2017-09-27 09:00 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-27 09:30 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-27 10:10 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-27 12:20 +0200
                Re: Python 3 Statsmodels & Pandas "Rebecca N. Palmer" <rebecca_palmer@zoho.com> - 2017-09-29 23:40 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-30 01:00 +0200
                Re: Python 3 Statsmodels & Pandas "Rebecca N. Palmer" <rebecca_palmer@zoho.com> - 2017-09-30 10:20 +0200
                Re: Python 3 Statsmodels & Pandas Ghislain Vaillant <ghisvail@gmail.com> - 2017-09-30 11:20 +0200
                Re: Python 3 Statsmodels & Pandas Dmitry Shachnev <mitya57@debian.org> - 2017-09-30 11:30 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-30 18:00 +0200
                Re: Python 3 Statsmodels & Pandas "Rebecca N. Palmer" <rebecca_palmer@zoho.com> - 2017-09-30 18:40 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-22 08:20 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-23 16:10 +0200
                Re: Python 3 Statsmodels & Pandas Andreas Tille <andreas@an3as.eu> - 2017-09-24 13:30 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-25 01:00 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <yoh@onerussian.com> - 2017-09-22 00:20 +0200
                Re: Python 3 Statsmodels & Pandas Piotr Ożarowski <piotr@debian.org> - 2017-09-22 11:00 +0200
                Re: Python 3 Statsmodels & Pandas Diane Trout <diane@ghic.org> - 2017-09-22 21:40 +0200
                Re: Python 3 Statsmodels & Pandas Ghislain Vaillant <ghisvail@gmail.com> - 2017-09-23 11:50 +0200
                Re: Python 3 Statsmodels & Pandas Yaroslav Halchenko <debian@onerussian.com> - 2017-09-23 16:00 +0200
                Re: Python 3 Statsmodels & Pandas Piotr Ożarowski <piotr@debian.org> - 2017-09-25 11:20 +0200
      Bug#729956: Python 3 Statsmodels & Pandas Matthias Klose <doko@debian.org> - 2017-09-17 11:20 +0200

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