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Bug#1117398: gap-cryst: FTBFS: 29 failures in 3 of 5 files

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  Bug#1117398: gap-cryst: FTBFS: 29 failures in 3 of 5 files Santiago Vila <sanvila@debian.org> - 2025-10-05 19:40 +0200
    Bug#1117398: marked as done (gap-cryst: FTBFS: 29 failures in 3  of 5 files) "Debian Bug Tracking System" <owner@bugs.debian.org> - 2025-11-01 19:00 +0100

#400520 — Bug#1117398: gap-cryst: FTBFS: 29 failures in 3 of 5 files

Package: src:gap-cryst
Version: 4.1.27-1
Severity: serious
Tags: ftbfs forky sid

Dear maintainer:

During a rebuild of all packages in unstable, this package failed to build.

Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:

https://people.debian.org/~sanvila/build-logs/202510/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:gap-cryst, so that this is still
visible in the BTS web page for this package.

Thanks.

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh_testdir
dh_testroot
make -C doc clean
make[1]: Entering directory '/<<PKGBUILDDIR>>/doc'
rm -f ./*.{html,txt,css,js}
rm -f ./make_manuals.out ./mathjax
rm -f ./manual.{aux,blg,brf,idx,ilg,ind,log,out,pnr,toc.gz,dvi,pdf,ps}
rm -f ./manual{,-bw}.{lab,six.gz}
rm -f manualbib.xml.bib
rm -f ../htm/*.htm
rm -f manual.example-?.tst
make[1]: Leaving directory '/<<PKGBUILDDIR>>/doc'
rm -rf debian/gaproot
rm -f debian/gap.tst

[... snipped ...]

iso := IsomorphismPcpGroup(G);;
# Expected output:
# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:125
# Input is:
H := Image(iso);;
# Expected output:
# But found:
Error, Variable: 'iso' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:126
# Input is:
h := Cgs(H)[1];;
# Expected output:
# But found:
Error, Variable: 'H' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:127
# Input is:
g := PreImage(iso, h);;
# Expected output:
# But found:
Error, Variable: 'iso' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:128
# Input is:
h = Image(iso, g);
# Expected output:
true
# But found:
Error, Variable: 'h' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:130
# Input is:
IsomorphismPcpGroup( PointGroup( G ) );;
# Expected output:

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:179
# Input is:
W := WyckoffPositions(G);;
# Expected output:
# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:192
# Input is:
Set(WyckoffPositions( G^C )) = Set(WyckoffPositions(SpaceGroupIT(3,183)^C));
# Expected output:
true

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:197
# Input is:
W := WyckoffPositions(G);;
# Expected output:
# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:201
# Input is:
Set(WyckoffPositions( G^TransposedMat(C) )) = Set(WyckoffPositions(SpaceGroupO\
nLeftIT(3,183)^TransposedMat(C)));
# Expected output:
true
# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:206
# Input is:
W := WyckoffPositions(G);;
# Expected output:
# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:240
# Input is:
List( M, x -> IsomorphismPcpGroup( PointGroup(x) ) );;
# Expected output:

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:272
# Input is:
List( M, x -> IsomorphismPcpGroup( PointGroup(x) ) );;
# Expected output:

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:277
# Input is:
NaturalHomomorphismByNormalSubgroup( G, K );;
# Expected output:

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/cryst.tst:282
# Input is:
NaturalHomomorphismByNormalSubgroup( G, K );;
# Expected output:

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 2nd choice method found for `IsomorphismPcpGroup' on 1 arguments
########
    6650 ms (141 ms GC) and 1005MB allocated for cryst.tst
testing: debian/gaproot/pkg/Cryst/tst/manual.tst
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:70
# Input is:
W := WyckoffPositions(S);
# Expected output:
[ < Wyckoff position, point group 3, translation := [ 0, 0 ], 
    basis := [  ] >
    , < Wyckoff position, point group 3, translation := [ 2/3, 1/3 ], 
    basis := [  ] >
    , < Wyckoff position, point group 3, translation := [ 1/3, 2/3 ], 
    basis := [  ] >
    , < Wyckoff position, point group 2, translation := [ 0, 0 ], 
    basis := [ [ 1, -1 ] ] >
    , < Wyckoff position, point group 1, translation := [ 0, 0 ], 
    basis := [ [ 1, 0 ], [ 0, 1 ] ] >
     ]

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:94
# Input is:
ForAll( W, IsWyckoffPosition );
# Expected output:
true

# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:97
# Input is:
WyckoffBasis( W[4] );
# Expected output:
[ [ 1, -1 ] ]

# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:100
# Input is:
WyckoffTranslation( W[3] );
# Expected output:
[ 1/3, 2/3 ]

# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:103
# Input is:
WyckoffSpaceGroup( W[1] );
# Expected output:
SpaceGroupOnRightIT(2,14,'1')

# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:106
# Input is:
stab := WyckoffStabilizer( W[4] );
# Expected output:
Group([ [ [ 0, -1, 0 ], [ -1, 0, 0 ], [ 0, 0, 1 ] ] ])

# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:109
# Input is:
IsAffineCrystGroupOnRight( stab );
# Expected output:
true

# But found:
Error, Variable: 'stab' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:112
# Input is:
orb := WyckoffOrbit( W[4] );
# Expected output:
[ < Wyckoff position, point group 2, translation := [ 0, 0 ], 
    basis := [ [ 1, -1 ] ] >
    , < Wyckoff position, point group 2, translation := [ 0, 0 ], 
    basis := [ [ 1, 2 ] ] >
    , < Wyckoff position, point group 2, translation := [ 0, 0 ], 
    basis := [ [ -2, -1 ] ] >
     ]
# But found:
Error, Variable: 'W' must have a value
########
########> Diff in debian/gaproot/pkg/Cryst/tst/manual.tst:120
# Input is:
Set(orb);
# Expected output:
[ < Wyckoff position, point group 2, translation := [ 0, 0 ], 
    basis := [ [ 1, -1 ] ] >
     ]

# But found:
Error, Variable: 'orb' must have a value
########
     147 ms (30 ms GC) and 24.3MB allocated for manual.tst
testing: debian/gaproot/pkg/Cryst/tst/subgrp.tst
    1387 ms (63 ms GC) and 300MB allocated for subgrp.tst
testing: debian/gaproot/pkg/Cryst/tst/wyckoff.tst
########> Diff in debian/gaproot/pkg/Cryst/tst/wyckoff.tst:5
# Input is:
List( [1..17], i -> Length( WyckoffPositions( SpaceGroupIT(2,i) ) ) );
# Expected output:
[ 1, 5, 3, 1, 2, 9, 4, 3, 6, 4, 7, 4, 4, 5, 4, 4, 6 ]

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
########> Diff in debian/gaproot/pkg/Cryst/tst/wyckoff.tst:8
# Input is:
List( [1..23], i -> Length( WyckoffPositions( SpaceGroupIT(3,10*i-3) ) ) );
# Expected output:
[ 1, 5, 5, 4, 27, 5, 15, 4, 9, 11, 5, 9, 12, 8, 7, 4, 6, 14, 15, 6, \
11, 8, 9 ]

# But found:
Error, no method found! For debugging hints type ?Recovery from NoMe\
thodFound
Error, no 1st choice method found for `ClosureGroup' on 2 arguments
########
      36 ms (28 ms GC) and 1.61MB allocated for wyckoff.tst
testing: debian/gaproot/pkg/Cryst/tst/zass.tst
     228 ms (30 ms GC) and 51.9MB allocated for zass.tst
-----------------------------------
total      8448 ms (292 ms GC) and 1.35GB allocated
             29 failures in 3 of 5 files

#I  Errors detected while testing

grep -q "^#I  No errors detected while testing" debian/gap.tst
make[1]: *** [debian/rules:18: execute_after_dh_auto_test] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:42: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

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#403698 — Bug#1117398: marked as done (gap-cryst: FTBFS: 29 failures in 3 of 5 files)

[Multipart message — attachments visible in raw view] — view raw

Your message dated Sat, 01 Nov 2025 17:49:32 +0000
with message-id <E1vFFjI-00H6m6-04@fasolo.debian.org>
and subject line Bug#1117398: fixed in gap-cryst 4.1.30-1
has caused the Debian Bug report #1117398,
regarding gap-cryst: FTBFS: 29 failures in 3 of 5 files
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
1117398: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1117398
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems

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