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Groups > linux.debian.bugs.rc > #383079 > unrolled thread
| Started by | Andrey Rakhmatullin <wrar@debian.org> |
|---|---|
| First post | 2025-01-30 11:50 +0100 |
| Last post | 2025-02-04 11:30 +0100 |
| Articles | 3 — 2 participants |
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Bug#1094700: openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’} Andrey Rakhmatullin <wrar@debian.org> - 2025-01-30 11:50 +0100
Processed: openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’} "Debian Bug Tracking System" <owner@bugs.debian.org> - 2025-01-30 11:50 +0100
Bug#1094700: marked as done (openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’}) "Debian Bug Tracking System" <owner@bugs.debian.org> - 2025-02-04 11:30 +0100
| From | Andrey Rakhmatullin <wrar@debian.org> |
|---|---|
| Date | 2025-01-30 11:50 +0100 |
| Subject | Bug#1094700: openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’} |
| Message-ID | <KaAhs-d3kM-35@gated-at.bofh.it> |
Source: openmm
Version: 8.1.2+dfsg-2
Severity: serious
Tags: ftbfs
Control: block 1082237 by -1
https://buildd.debian.org/status/fetch.php?pkg=openmm&arch=amd64&ver=8.1.2%2Bdfsg-2%2Bb1&stamp=1737990080&raw=0
In file included from /usr/lib/x86_64-linux-
gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913,
from /usr/lib/x86_64-linux-
gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12,
from /usr/lib/x86_64-linux-
gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5,
from src/swig_doxygen/OpenMMSwig.cxx:7413:
/usr/lib/x86_64-linux-
gnu/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2:
warning: #warning "Using deprecated NumPy API, disable it with " "#define
NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
src/swig_doxygen/OpenMMSwig.cxx: In function ‘int
Py_SequenceToVecVec3(PyObject*, std::vector<OpenMM::Vec3>&)’:
src/swig_doxygen/OpenMMSwig.cxx:7709:60: error: cannot convert ‘PyObject*’ {aka
‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’}
7709 | if (PyArray_Check(stripped) && PyArray_ISCARRAY_RO(stripped) &&
PyArray_NDIM(stripped) == 2 && PyArray_DIM(stripped, 1) == 3) {
| ^~~~~~~~
| |
| PyObject*
{aka _object*}
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.12.8-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=ru_RU.UTF-8, LC_CTYPE=ru_RU.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
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| From | "Debian Bug Tracking System" <owner@bugs.debian.org> |
|---|---|
| Date | 2025-01-30 11:50 +0100 |
| Subject | Processed: openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’} |
| Message-ID | <KaAhs-d3kM-43@gated-at.bofh.it> |
| In reply to | #383079 |
Processing control commands: > block 1082237 by -1 Bug #1082237 [release.debian.org] transition: numpy 2 1082237 was blocked by: 1094332 1094369 1094370 1094371 1094372 1094373 1094374 1094375 1094376 1094377 1094477 1094478 1094479 1094631 1094696 1094697 1094699 1082237 was not blocking any bugs. Added blocking bug(s) of 1082237: 1094700 -- 1082237: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1082237 1094700: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1094700 Debian Bug Tracking System Contact owner@bugs.debian.org with problems
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| From | "Debian Bug Tracking System" <owner@bugs.debian.org> |
|---|---|
| Date | 2025-02-04 11:30 +0100 |
| Subject | Bug#1094700: marked as done (openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’}) |
| Message-ID | <KcolP-ej7a-1@gated-at.bofh.it> |
| In reply to | #383079 |
[Multipart message — attachments visible in raw view] — view raw
Your message dated Tue, 04 Feb 2025 10:20:40 +0000
with message-id <E1tfG2q-001fsp-A8@fasolo.debian.org>
and subject line Bug#1094700: fixed in openmm 8.1.2+dfsg-3
has caused the Debian Bug report #1094700,
regarding openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’}
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)
--
1094700: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1094700
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
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