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Bug#1103134: r-cran-rstanarm: FTBFS in testing/i386: make[1]: *** [/usr/lib/R/etc/Makeconf:202: stan_files/bernoulli.o] Error 1

From Lucas Nussbaum <lucas@debian.org>
Newsgroups linux.debian.bugs.rc
Subject Bug#1103134: r-cran-rstanarm: FTBFS in testing/i386: make[1]: *** [/usr/lib/R/etc/Makeconf:202: stan_files/bernoulli.o] Error 1
Date 2025-04-14 14:00 +0200
Message-ID <KBqDN-ds2a-23@gated-at.bofh.it> (permalink)
Organization linux.* mail to news gateway

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Source: r-cran-rstanarm
Version: 2.32.1-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas@debian.org
Usertags: ftbfs-20250414 ftbfs-trixie

Hi,

During a rebuild of all packages in testing (trixie), your package failed
to build on i386.


Relevant part (hopefully):
> make[1]: Entering directory '/build/reproducible-path/r-cran-rstanarm-2.32.1/src'
> "/usr/lib/R/bin/Rscript" -e "source(file.path('..', 'tools', 'make_cc.R')); make_cc(commandArgs(TRUE))" stan_files/bernoulli.stan
> code for methods in class "Rcpp_model_base" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
> code for methods in class "Rcpp_model_base" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
> code for methods in class "Rcpp_stan_fit" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
> code for methods in class "Rcpp_stan_fit" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
> Wrote C++ file "stan_files/bernoulli.cc"
> 
> 
> g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I"../inst/include" -I"/usr/lib/R/site-library/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/rstan/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include'    -I/usr/include -DTBB_INTERFACE_NEW -I'/usr/lib/R/site-library/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -DTBB_INTERFACE_NEW    -fpic  -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2   -c stan_files/bernoulli.cc -o stan_files/bernoulli.o
> virtual memory exhausted: Operation not permitted
> make[1]: *** [/usr/lib/R/etc/Makeconf:202: stan_files/bernoulli.o] Error 1


The full build log is available from:
http://qa-logs.debian.net/2025/04/14/r-cran-rstanarm_2.32.1-2_testing-i386.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20250414;users=lucas@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20250414&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.

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Thread

Bug#1103134: r-cran-rstanarm: FTBFS in testing/i386: make[1]: *** [/usr/lib/R/etc/Makeconf:202: stan_files/bernoulli.o] Error 1 Lucas Nussbaum <lucas@debian.org> - 2025-04-14 14:00 +0200
  Bug#1103134: marked as done (r-cran-rstanarm: FTBFS in  testing/i386: make[1]: *** [/usr/lib/R/etc/Makeconf:202: stan_files/bernoulli.o]  Error 1) "Debian Bug Tracking System" <owner@bugs.debian.org> - 2025-04-25 02:10 +0200

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