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Groups > linux.debian.bugs.dist > #920387 > unrolled thread
| Started by | Santiago Vila <sanvila@debian.org> |
|---|---|
| First post | 2018-10-01 01:10 +0200 |
| Last post | 2018-10-18 17:10 +0200 |
| Articles | 14 — 5 participants |
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Bug#909990: nibabel: FTBFS (Failed example) Santiago Vila <sanvila@debian.org> - 2018-10-01 01:10 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Andreas Tille <andreas@an3as.eu> - 2018-10-08 15:40 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <debian@onerussian.com> - 2018-10-08 17:30 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Andreas Tille <tille@debian.org> - 2018-10-09 10:40 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-12 15:20 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-12 15:20 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Andreas Tille <tille@debian.org> - 2018-10-13 23:20 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-14 02:40 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Andreas Tille <tille@debian.org> - 2018-10-14 09:20 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-18 15:30 +0200
Bug#909990: New version uploaded - does that problem persist? Andreas Tille <andreas@an3as.eu> - 2018-10-12 13:40 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-18 15:30 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Andreas Tille <tille@debian.org> - 2018-10-18 16:30 +0200
Bug#909990: Stange import error for nibabel when trying to import from .pybuild Yaroslav Halchenko <yoh@debian.org> - 2018-10-18 17:10 +0200
| From | Santiago Vila <sanvila@debian.org> |
|---|---|
| Date | 2018-10-01 01:10 +0200 |
| Subject | Bug#909990: nibabel: FTBFS (Failed example) |
| Message-ID | <wDT0B-87w-15@gated-at.bofh.it> |
Package: src:nibabel
Version: 2.3.0-1
Severity: serious
Tags: ftbfs
Dear maintainer:
I tried to build this package in buster but it failed:
--------------------------------------------------------------------------------
[...]
debian/rules build-indep
dh build-indep --buildsystem=python_distutils --builddirectory=build --with=python2,python3
dh_update_autotools_config -i -O--buildsystem=python_distutils -O--builddirectory=build
dh_auto_configure -i -O--buildsystem=python_distutils -O--builddirectory=build
dh_auto_configure: Please use the third-party "pybuild" build system instead of python-distutils
dh_auto_configure: This feature will be removed in compat 12.
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
dh_auto_build: Please use the third-party "pybuild" build system instead of python-distutils
dh_auto_build: This feature will be removed in compat 12.
python setup.py build --force
Missing optional package "dicom" provided by package "pydicom"; you may get run-time errors
running build
[... snipped ...]
dslice = dslice.astype(out_dtype)
./<<PKGBUILDDIR>>/nibabel/volumeutils.py:818: ComplexWarning: Casting complex values to real discards the imaginary part
dslice = dslice.astype(in_cast)
........................................................
======================================================================
FAIL: Doctest: nibabel.deprecated.FutureWarningMixin
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python3.7/doctest.py", line 2198, in runTest
raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for nibabel.deprecated.FutureWarningMixin
File "/<<PKGBUILDDIR>>/nibabel/deprecated.py", line 42, in FutureWarningMixin
----------------------------------------------------------------------
File "/<<PKGBUILDDIR>>/nibabel/deprecated.py", line 53, in nibabel.deprecated.FutureWarningMixin
Failed example:
with warnings.catch_warnings(record=True) as warns:
d = D()
warns[0].message
Expected:
FutureWarning("Please, don't use this class",)
Got:
FutureWarning("Please, don't use this class")
======================================================================
FAIL: nibabel.tests.test_testing.test_clear_and_catch_warnings
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/<<PKGBUILDDIR>>/nibabel/tests/test_testing.py", line 89, in test_clear_and_catch_warnings
assert_warn_len_equal(my_mod, 1)
File "/<<PKGBUILDDIR>>/nibabel/tests/test_testing.py", line 72, in assert_warn_len_equal
assert_equal(len(mod_warns), 2) # including 'version'
AssertionError: 1 != 2
----------------------------------------------------------------------
Ran 7721 tests in 68.265s
FAILED (SKIP=55, failures=2)
make[2]: *** [Makefile:94: unittest] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: *** [debian/rules:43: python-test3.7] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:18: build-indep] Error 2
dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2
--------------------------------------------------------------------------------
The build was made in my autobuilder with "dpkg-buildpackage -A"
but it also fails here:
https://tests.reproducible-builds.org/debian/rb-pkg/unstable/amd64/nibabel.html
where you can get a full build log if you need it.
If this is really a bug in one of the build-depends, please use reassign and affects,
so that this is still visible in the BTS web page for this package.
Thanks.
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| From | Andreas Tille <andreas@an3as.eu> |
|---|---|
| Date | 2018-10-08 15:40 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wGDVn-7T2-1@gated-at.bofh.it> |
| In reply to | #920387 |
Hi,
to see what I can do about bug #909990 I've imported the latest version
into the packaging Git[1]. When beeing inside the main dir of the Git
repository I can easily do
neurodebian-team/pynifti(debian) $ python3
Python 3.6.6 (default, Jun 27 2018, 14:44:17)
[GCC 8.1.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import nibabel
>>>
However, if I try inside the .pybuild dir I get:
/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build# python3.6
Python 3.6.7rc1 (default, Sep 27 2018, 09:51:25)
[GCC 8.2.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import nibabel
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/__init__.py", line 45, in <module>
from .loadsave import load, save
File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/loadsave.py", line 18, in <module>
from .imageclasses import all_image_classes
File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/imageclasses.py", line 16, in <module>
from .minc1 import Minc1Image
File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/minc1.py", line 20, in <module>
from .deprecated import FutureWarningMixin
ImportError: cannot import name 'FutureWarningMixin'
>>>
This leads to errors when the build process is trying to create the
docs via
export PYTHONPATH=`pybuild --print build_dir --interpreter python3` ; \
cd doc && /usr/bin/make html-only
(which triggers exactly the above error message).
Any idea what might went wrong here? Its definitely not the slightly
different Python 3.6 version - I tried a local build using 3.6.6 with
the very same effect.
Kind regards
Andreas.
[1] Vcs-Git: https://salsa.debian.org/neurodebian-team/pynifti.git -b debian
(yes, I switched to Branch debian instead of current package 2.3.0-1
which has non-default Branch dist/debian/proper)
--
http://fam-tille.de
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| From | Yaroslav Halchenko <debian@onerussian.com> |
|---|---|
| Date | 2018-10-08 17:30 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wGFDP-th-1@gated-at.bofh.it> |
| In reply to | #921524 |
Thank you Andreas for looking into it 2.3.1 bugfix is around the corner https://github.com/nipy/nibabel/pull/667 so I will aim to make sure the #909990 is fixed within it (for starters - I do not think I observed this exception when building from current RC branch) On Mon, 08 Oct 2018, Andreas Tille wrote: > Hi, > to see what I can do about bug #909990 I've imported the latest version > into the packaging Git[1]. When beeing inside the main dir of the Git > repository I can easily do > neurodebian-team/pynifti(debian) $ python3 > Python 3.6.6 (default, Jun 27 2018, 14:44:17) > [GCC 8.1.0] on linux > Type "help", "copyright", "credits" or "license" for more information. > >>> import nibabel > However, if I try inside the .pybuild dir I get: > /build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build# python3.6 > Python 3.6.7rc1 (default, Sep 27 2018, 09:51:25) > [GCC 8.2.0] on linux > Type "help", "copyright", "credits" or "license" for more information. > >>> import nibabel > Traceback (most recent call last): > File "<stdin>", line 1, in <module> > File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/__init__.py", line 45, in <module> > from .loadsave import load, save > File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/loadsave.py", line 18, in <module> > from .imageclasses import all_image_classes > File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/imageclasses.py", line 16, in <module> > from .minc1 import Minc1Image > File "/build/nibabel-2.3.0/.pybuild/cpython3_3.6_nibabel/build/nibabel/minc1.py", line 20, in <module> > from .deprecated import FutureWarningMixin > ImportError: cannot import name 'FutureWarningMixin' -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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| From | Andreas Tille <tille@debian.org> |
|---|---|
| Date | 2018-10-09 10:40 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wGVIB-1oN-1@gated-at.bofh.it> |
| In reply to | #921547 |
Hi Yaroslav,
On Mon, Oct 08, 2018 at 11:25:53AM -0400, Yaroslav Halchenko wrote:
> Thank you Andreas for looking into it
You are welcome.
> 2.3.1 bugfix is around the corner
> https://github.com/nipy/nibabel/pull/667
> so I will aim to make sure the #909990 is fixed within it (for starters
> - I do not think I observed this exception when building from current RC
> branch)
I used this as quilt patch and the package builds now (after I excluded
another quite suspicious test in a quilt patch). The package builds now
and I've team uploaded to unstable.
BTW, I'd consider it more straightforward if the repository would be
renamed from
https://salsa.debian.org/neurodebian-team/pynifti
to
https://salsa.debian.org/neurodebian-team/nibabel
since I would expect the repository named like the source package (and
some Blends tools are half way relying on this).
Kind regards
Andreas.
--
http://fam-tille.de
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-12 15:20 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wI5we-1By-5@gated-at.bofh.it> |
| In reply to | #921644 |
On Tue, 09 Oct 2018, Andreas Tille wrote: > > 2.3.1 bugfix is around the corner > > https://github.com/nipy/nibabel/pull/667 > > so I will aim to make sure the #909990 is fixed within it (for starters > > - I do not think I observed this exception when building from current RC > > branch) > I used this as quilt patch and the package builds now (after I excluded > another quite suspicious test in a quilt patch). The package builds now > and I've team uploaded to unstable. ok... will merge for the next upload to proceed -- we mitigated all known issues, and the beast builds fine all the way down to jessie, so release is coming soon now > BTW, I'd consider it more straightforward if the repository would be > renamed from > https://salsa.debian.org/neurodebian-team/pynifti > to > https://salsa.debian.org/neurodebian-team/nibabel > since I would expect the repository named like the source package (and > some Blends tools are half way relying on this). good idea, done will commit now adjustment to debian/control -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-12 15:20 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wI5we-1By-7@gated-at.bofh.it> |
| In reply to | #922206 |
On Fri, 12 Oct 2018, Yaroslav Halchenko wrote: > On Tue, 09 Oct 2018, Andreas Tille wrote: > > > 2.3.1 bugfix is around the corner > > > https://github.com/nipy/nibabel/pull/667 > > > so I will aim to make sure the #909990 is fixed within it (for starters > > > - I do not think I observed this exception when building from current RC > > > branch) > > I used this as quilt patch and the package builds now (after I excluded > > another quite suspicious test in a quilt patch). The package builds now > > and I've team uploaded to unstable. > ok... will merge for the next upload to proceed -- we mitigated all > known issues, and the beast builds fine all the way down to jessie, so > release is coming soon now oi... I guess we caused you confusion and unneeded work??? I see that you updated debian branch redoing packaging for 2.3.0-1 which was uploaded already awhile back, while we use this ad-hoc dist/debian/proper branch (should be the default when you clone that repo): $> grep Vcs-Git debian/control Vcs-Git: https://salsa.debian.org/neurodebian-team/pynifti.git -b dist/debian/proper so not yet sure how to proceed with your changes. meanwhile pushed my local state of dist/debian/proper -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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| From | Andreas Tille <tille@debian.org> |
|---|---|
| Date | 2018-10-13 23:20 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wIzuh-2mD-5@gated-at.bofh.it> |
| In reply to | #922207 |
On Fri, Oct 12, 2018 at 09:15:37AM -0400, Yaroslav Halchenko wrote:
> > ok... will merge for the next upload to proceed -- we mitigated all
> > known issues, and the beast builds fine all the way down to jessie, so
> > release is coming soon now
>
> oi... I guess we caused you confusion and unneeded work???
Urgs, yes! While I for sure need to blame myself that I missed to check
the diff between repository and uploads, your naming of branches is
irritating.
> I see that you updated debian branch redoing packaging for 2.3.0-1 which was
> uploaded already awhile back, while we use this ad-hoc dist/debian/proper
> branch (should be the default when you clone that repo):
Could you imagine to use a branch named debian? In my attempt to update
packages mentioned in Debian Med tasks which are not uploaded for a long
time and need fixing Vcs fields (and usually lots of lintian issues) I
migrated pyepl to the "kind of usual" repository layout. Do you have
some tools that are relying on those unusual names (= did I broke
something when renaming dist/debian/proper to debian in pyepl)?
> $> grep Vcs-Git debian/control
> Vcs-Git: https://salsa.debian.org/neurodebian-team/pynifti.git -b dist/debian/proper
>
> so not yet sure how to proceed with your changes. meanwhile pushed my local
> state of dist/debian/proper
I'd volunteer to check the diff between your current changes and my work
and merge everything - but can I please use a branch named debian?
Kind regards
Andreas.
--
http://fam-tille.de
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-14 02:40 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wICBP-46I-7@gated-at.bofh.it> |
| In reply to | #922375 |
On Sat, 13 Oct 2018, Andreas Tille wrote:
> On Fri, Oct 12, 2018 at 09:15:37AM -0400, Yaroslav Halchenko wrote:
> > > ok... will merge for the next upload to proceed -- we mitigated all
> > > known issues, and the beast builds fine all the way down to jessie, so
> > > release is coming soon now
> > oi... I guess we caused you confusion and unneeded work???
> Urgs, yes! While I for sure need to blame myself that I missed to check
> the diff between repository and uploads, your naming of branches is
> irritating.
> > I see that you updated debian branch redoing packaging for 2.3.0-1 which was
> > uploaded already awhile back, while we use this ad-hoc dist/debian/proper
> > branch (should be the default when you clone that repo):
> Could you imagine to use a branch named debian? In my attempt to update
> packages mentioned in Debian Med tasks which are not uploaded for a long
> time and need fixing Vcs fields (and usually lots of lintian issues) I
> migrated pyepl to the "kind of usual" repository layout. Do you have
> some tools that are relying on those unusual names (= did I broke
> something when renaming dist/debian/proper to debian in pyepl)?
> > $> grep Vcs-Git debian/control
> > Vcs-Git: https://salsa.debian.org/neurodebian-team/pynifti.git -b dist/debian/proper
> > so not yet sure how to proceed with your changes. meanwhile pushed my local
> > state of dist/debian/proper
> I'd volunteer to check the diff between your current changes and my work
> and merge everything - but can I please use a branch named debian?
quick one: well, the main confusion stems from that fact that
originally it was pynifti project and there is still that debian branch
for its packaging, which I thought would be the one up to date with
$> apt-cache policy python-nifti
python-nifti:
Installed: (none)
Candidate: 0.20100607.1-4.1
Version table:
0.20100607.1-4.1 600
100 http://http.debian.net/debian stretch/main amd64 Packages
600 http://http.debian.net/debian sid/main amd64 Packages
0.20100607.1-4~nd70+1+nd90+1 500
500 http://neuro.debian.net/debian stretch/main amd64 Packages
but now I don't know -- locally it is stuck somewhere in 2009. So, sure
-- could be 'debian' for what I care
--
Yaroslav O. Halchenko
Center for Open Neuroscience http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik
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| From | Andreas Tille <tille@debian.org> |
|---|---|
| Date | 2018-10-14 09:20 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wIIQV-7Xf-1@gated-at.bofh.it> |
| In reply to | #922399 |
Hi Yaroslav,
On Sat, Oct 13, 2018 at 08:29:53PM -0400, Yaroslav Halchenko wrote:
>
> > I'd volunteer to check the diff between your current changes and my work
> > and merge everything - but can I please use a branch named debian?
>
> quick one: well, the main confusion stems from that fact that
> originally it was pynifti project and there is still that debian branch
> for its packaging, which I thought would be the one up to date with
>
> $> apt-cache policy python-nifti
> python-nifti:
> Installed: (none)
> Candidate: 0.20100607.1-4.1
> Version table:
> 0.20100607.1-4.1 600
> 100 http://http.debian.net/debian stretch/main amd64 Packages
> 600 http://http.debian.net/debian sid/main amd64 Packages
> 0.20100607.1-4~nd70+1+nd90+1 500
> 500 http://neuro.debian.net/debian stretch/main amd64 Packages
>
> but now I don't know -- locally it is stuck somewhere in 2009. So, sure
> -- could be 'debian' for what I care
I took your word as confirmation to restructure the repository.
Moreover I have ported all my changes to this repository. I have also
seen that you commited some git state. I have used git mode in watch
file to easily fetch the latest HEAD from upstream and at the same time
be able to use Debian tools. I have not tagged the status as upload
since it might be better if you have a final review.
Kind regards
Andreas.
--
http://fam-tille.de
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-18 15:30 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wKgxb-6rK-5@gated-at.bofh.it> |
| In reply to | #922416 |
On Sun, 14 Oct 2018, Andreas Tille wrote: > Hi Yaroslav, > On Sat, Oct 13, 2018 at 08:29:53PM -0400, Yaroslav Halchenko wrote: > > > I'd volunteer to check the diff between your current changes and my work > > > and merge everything - but can I please use a branch named debian? > > quick one: well, the main confusion stems from that fact that > > originally it was pynifti project and there is still that debian branch > > for its packaging, which I thought would be the one up to date with > > $> apt-cache policy python-nifti > > python-nifti: > > Installed: (none) > > Candidate: 0.20100607.1-4.1 > > Version table: > > 0.20100607.1-4.1 600 > > 100 http://http.debian.net/debian stretch/main amd64 Packages > > 600 http://http.debian.net/debian sid/main amd64 Packages > > 0.20100607.1-4~nd70+1+nd90+1 500 > > 500 http://neuro.debian.net/debian stretch/main amd64 Packages > > but now I don't know -- locally it is stuck somewhere in 2009. So, sure > > -- could be 'debian' for what I care > I took your word as confirmation to restructure the repository. > Moreover I have ported all my changes to this repository. I have also > seen that you commited some git state. I have used git mode in watch > file to easily fetch the latest HEAD from upstream and at the same time > be able to use Debian tools. I have not tagged the status as upload > since it might be better if you have a final review. Yet to look at your changes, but for now I have - pushed debian/2.3.1-1 packaging (withing "old" custom "on top of upstream releases in git" dist/debian/proper branch) - force-pushed $> git push -f salsa debian/2.3.0-1 2.3.0 Enumerating objects: 1, done. Counting objects: 100% (1/1), done. Writing objects: 100% (1/1), 828 bytes | 828.00 KiB/s, done. Total 1 (delta 0), reused 0 (delta 0) To salsa.debian.org:neurodebian-team/nibabel.git + 3bb95b3b...1ea63921 2.3.0 -> 2.3.0 (forced update) + 62f64245...8519cb3d debian/2.3.0-1 -> debian/2.3.0-1 (forced update) so they correspond to the previous release which we already had in debian. -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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| From | Andreas Tille <andreas@an3as.eu> |
|---|---|
| Date | 2018-10-12 13:40 +0200 |
| Subject | Bug#909990: New version uploaded - does that problem persist? |
| Message-ID | <wI3Xr-BQ-3@gated-at.bofh.it> |
| In reply to | #920387 |
Control: severity -1 important
Control: tags -1 moreinfo
Hi Santiago,
thanks for your QA check. I have uploaded a new version. Could you
please redo your batch job with this version and confirm whether the
problem persists or if it is possibly solved by the new version?
Kind regards
Andreas.
--
http://fam-tille.de
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-18 15:30 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wKgxb-6rK-3@gated-at.bofh.it> |
| In reply to | #920387 |
On Thu, 18 Oct 2018, Yaroslav Halchenko wrote: > Yet to look at your changes, but for now I have > - pushed debian/2.3.1-1 packaging (withing "old" custom > "on top of upstream releases in git" dist/debian/proper branch) > - force-pushed > $> git push -f salsa debian/2.3.0-1 2.3.0 > Enumerating objects: 1, done. > Counting objects: 100% (1/1), done. > Writing objects: 100% (1/1), 828 bytes | 828.00 KiB/s, done. > Total 1 (delta 0), reused 0 (delta 0) > To salsa.debian.org:neurodebian-team/nibabel.git > + 3bb95b3b...1ea63921 2.3.0 -> 2.3.0 (forced update) > + 62f64245...8519cb3d debian/2.3.0-1 -> debian/2.3.0-1 (forced update) > so they correspond to the previous release which we already had in debian. oh now it is a mess -- I have missed the fact that you uploaded a snapshot 2.3.0+git20181012.791678e-1 to Debian... -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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| From | Andreas Tille <tille@debian.org> |
|---|---|
| Date | 2018-10-18 16:30 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wKhtg-717-1@gated-at.bofh.it> |
| In reply to | #923137 |
On Thu, Oct 18, 2018 at 09:21:37AM -0400, Yaroslav Halchenko wrote:
>
> On Thu, 18 Oct 2018, Yaroslav Halchenko wrote:
>
> > Yet to look at your changes, but for now I have
>
> > - pushed debian/2.3.1-1 packaging (withing "old" custom
> > "on top of upstream releases in git" dist/debian/proper branch)
>
> > - force-pushed
>
> > $> git push -f salsa debian/2.3.0-1 2.3.0
> > Enumerating objects: 1, done.
> > Counting objects: 100% (1/1), done.
> > Writing objects: 100% (1/1), 828 bytes | 828.00 KiB/s, done.
> > Total 1 (delta 0), reused 0 (delta 0)
> > To salsa.debian.org:neurodebian-team/nibabel.git
> > + 3bb95b3b...1ea63921 2.3.0 -> 2.3.0 (forced update)
> > + 62f64245...8519cb3d debian/2.3.0-1 -> debian/2.3.0-1 (forced update)
>
> > so they correspond to the previous release which we already had in debian.
>
> oh now it is a mess -- I have missed the fact that you uploaded a
> snapshot 2.3.0+git20181012.791678e-1 to Debian...
I hope this will not create any trouble. I assumed you would follow Git
HEAD. if not the watch file needs to be reverted.
Sorry if I might have created work instead of lending a helping hand.
Kind regards
Andreas.
--
http://fam-tille.de
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| From | Yaroslav Halchenko <yoh@debian.org> |
|---|---|
| Date | 2018-10-18 17:10 +0200 |
| Subject | Bug#909990: Stange import error for nibabel when trying to import from .pybuild |
| Message-ID | <wKi5Y-7tG-15@gated-at.bofh.it> |
| In reply to | #923150 |
[Multipart message — attachments visible in raw view] — view raw
On Thu, 18 Oct 2018, Andreas Tille wrote: > On Thu, Oct 18, 2018 at 09:21:37AM -0400, Yaroslav Halchenko wrote: > > On Thu, 18 Oct 2018, Yaroslav Halchenko wrote: > > > Yet to look at your changes, but for now I have > > > - pushed debian/2.3.1-1 packaging (withing "old" custom > > > "on top of upstream releases in git" dist/debian/proper branch) > > > - force-pushed > > > $> git push -f salsa debian/2.3.0-1 2.3.0 > > > Enumerating objects: 1, done. > > > Counting objects: 100% (1/1), done. > > > Writing objects: 100% (1/1), 828 bytes | 828.00 KiB/s, done. > > > Total 1 (delta 0), reused 0 (delta 0) > > > To salsa.debian.org:neurodebian-team/nibabel.git > > > + 3bb95b3b...1ea63921 2.3.0 -> 2.3.0 (forced update) > > > + 62f64245...8519cb3d debian/2.3.0-1 -> debian/2.3.0-1 (forced update) > > > so they correspond to the previous release which we already had in debian. > > oh now it is a mess -- I have missed the fact that you uploaded a > > snapshot 2.3.0+git20181012.791678e-1 to Debian... > I hope this will not create any trouble. I assumed you would follow Git > HEAD. if not the watch file needs to be reverted. I don't think revertions would be needed, but we would need to merge the two > Sorry if I might have created work instead of lending a helping hand. life is life ;-) regardless, thanks for your work! -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik
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