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Groups > linux.debian.bugs.dist > #1261031 > unrolled thread
| Started by | Santiago Vila <sanvila@debian.org> |
|---|---|
| First post | 2025-09-11 23:00 +0200 |
| Last post | 2025-09-27 12:00 +0200 |
| Articles | 6 — 4 participants |
Back to article view | Back to linux.debian.bugs.dist
Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed Santiago Vila <sanvila@debian.org> - 2025-09-11 23:00 +0200
Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed Santiago Vila <sanvila@debian.org> - 2025-09-12 18:10 +0200
Bug#1114938: patch available for vtk9 in bookworm (was Re: Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed) Markus Blatt <markus@dr-blatt.de> - 2025-09-15 16:00 +0200
Bug#1114938: Change tag according to attached patch Markus Blatt <markus@dr-blatt.de> - 2025-09-15 18:10 +0200
Bug#1114938: patch available for vtk9 in bookworm (was Re: Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed) Dominique Belhachemi <domibel@debian.org> - 2025-09-20 18:10 +0200
Bug#1114938: vtk9 Fails to parse correct vtk files that contain raw binary data since security update to libexpat Drew Parsons <dparsons@debian.org> - 2025-09-27 12:00 +0200
| From | Santiago Vila <sanvila@debian.org> |
|---|---|
| Date | 2025-09-11 23:00 +0200 |
| Subject | Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed |
| Message-ID | <LtWyB-eBfp-1@gated-at.bofh.it> |
Package: src:dune-grid
Version: 2.9.0-2
Severity: serious
Control: fixed -1 2.10.0-1
Tags: ftbfs bookworm
Dear maintainer:
During a rebuild of all packages in bookworm, your package failed to build.
[ Note: The bug is marked as fixed with the version in trixie, but
packages in bookworm must still build in bookworm ].
Below you will find how the build ends (probably the most relevant part,
but not necessarily). If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/bookworm/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:dune-grid, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --builddirectory=build --buildsystem=cmake
dh_auto_clean -O--builddirectory=build -O--buildsystem=cmake
dh_autoreconf_clean -O--builddirectory=build -O--buildsystem=cmake
dh_clean -O--builddirectory=build -O--buildsystem=cmake
debian/rules binary
dh binary --builddirectory=build --buildsystem=cmake
dh_update_autotools_config -O--builddirectory=build -O--buildsystem=cmake
dh_autoreconf -O--builddirectory=build -O--buildsystem=cmake
debian/rules override_dh_auto_configure
[... snipped ...]
Modified Time: 110794
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
ERROR in ./s0002-vtktest-3D-leafview-conforming-appendedbase64.pvtu
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x33894400): Error parsing XML in stream at line 28, column 0, byte index 1711: not well-formed (invalid token)
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x338a1620): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x338a1620) returned failure for request: vtkInformation (0x338542d0)
Debug: Off
Modified Time: 111693
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x338681c0): Error parsing XML in stream at line 28, column 0, byte index 1711: not well-formed (invalid token)
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x33853340): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x331bd190): Algorithm vtkXMLUnstructuredGridReader(0x33853340) returned failure for request: vtkInformation (0x3386eb70)
Debug: Off
Modified Time: 111851
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x33894400): Error parsing XML in stream at line 28, column 0, byte index 1711: not well-formed (invalid token)
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x338a1620): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.461 ( 0.225s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x338a1620) returned failure for request: vtkInformation (0x338542d0)
Debug: Off
Modified Time: 111693
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
ERROR in ./s0002-vtktest-3D-leafview-conforming-appendedraw.pvtu
2025-09-07 09:09:32.466 ( 0.231s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x338681c0): Error parsing XML in stream at line 28, column 0, byte index 1724: junk after document element
2025-09-07 09:09:32.466 ( 0.231s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x33853340): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.466 ( 0.231s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x33853340) returned failure for request: vtkInformation (0x3389ee60)
Debug: Off
Modified Time: 115348
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x33894400): Error parsing XML in stream at line 28, column 0, byte index 1724: junk after document element
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x338a1620): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x3386c570): Algorithm vtkXMLUnstructuredGridReader(0x338a1620) returned failure for request: vtkInformation (0x33862470)
Debug: Off
Modified Time: 115505
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x338681c0): Error parsing XML in stream at line 28, column 0, byte index 1724: junk after document element
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x33853340): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x33853340) returned failure for request: vtkInformation (0x3389ee60)
Debug: Off
Modified Time: 115348
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
ERROR in ./s0002-vtktest-3D-leafview-nonconforming-appendedbase64.pvtu
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x33894400): Error parsing XML in stream at line 28, column 0, byte index 1721: not well-formed (invalid token)
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x338a1620): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x338a1620) returned failure for request: vtkInformation (0x3389eea0)
Debug: Off
Modified Time: 116247
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x338681c0): Error parsing XML in stream at line 28, column 0, byte index 1721: not well-formed (invalid token)
2025-09-07 09:09:32.467 ( 0.231s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x33853340): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.467 ( 0.232s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x331bd190): Algorithm vtkXMLUnstructuredGridReader(0x33853340) returned failure for request: vtkInformation (0x3389bc60)
Debug: Off
Modified Time: 116405
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
2025-09-07 09:09:32.467 ( 0.232s) [ 5DA9C040] vtkXMLParser.cxx:375 ERR| vtkXMLDataParser (0x33894400): Error parsing XML in stream at line 28, column 0, byte index 1721: not well-formed (invalid token)
2025-09-07 09:09:32.467 ( 0.232s) [ 5DA9C040] vtkXMLReader.cxx:521 ERR| vtkXMLUnstructuredGridReader (0x338a1620): Error parsing input file. ReadXMLInformation aborting.
2025-09-07 09:09:32.467 ( 0.232s) [ 5DA9C040] vtkExecutive.cxx:752 ERR| vtkCompositeDataPipeline (0x33869fe0): Algorithm vtkXMLUnstructuredGridReader(0x338a1620) returned failure for request: vtkInformation (0x3389eea0)
Debug: Off
Modified Time: 116247
Reference Count: 1
Registered Events: (none)
Request: REQUEST_INFORMATION
ALGORITHM_AFTER_FORWARD: 1
FORWARD_DIRECTION: 0
ERROR in ./s0002-vtktest-3D-leafview-nonconforming-appendedraw.pvtu
CHECK FAILED:
TEST FAILED: 1/1 checks failed in this test.
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpiexec detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:
Process name: [[51855,1],1]
Exit code: 1
--------------------------------------------------------------------------
Start 11: vtksequencetest
11/66 Test #11: vtksequencetest ....................................... Passed 0.86 sec
Start 12: starcdreadertest
12/66 Test #12: starcdreadertest ...................................... Passed 0.39 sec
Start 13: gmshtest-onedgrid
13/66 Test #13: gmshtest-onedgrid ..................................... Passed 0.33 sec
Start 14: gmshtest-uggrid
14/66 Test #14: gmshtest-uggrid ....................................... Passed 0.59 sec
Start 15: gmshtest-alberta2d
15/66 Test #15: gmshtest-alberta2d .................................... Passed 0.44 sec
Start 16: gmshtest-alberta3d
16/66 Test #16: gmshtest-alberta3d .................................... Passed 0.50 sec
Start 17: test-dgf-yasp
17/66 Test #17: test-dgf-yasp ......................................... Passed 0.44 sec
Start 18: test-dgf-yasp-offset
18/66 Test #18: test-dgf-yasp-offset .................................. Passed 0.34 sec
Start 19: test-dgf-oned
19/66 Test #19: test-dgf-oned ......................................... Passed 0.33 sec
Start 20: test-dgf-alberta
20/66 Test #20: test-dgf-alberta ...................................... Passed 0.34 sec
Start 21: test-dgf-ug
21/66 Test #21: test-dgf-ug ........................................... Passed 0.33 sec
Start 22: test-dgf-gmsh-ug
22/66 Test #22: test-dgf-gmsh-ug ...................................... Passed 0.33 sec
Start 23: geometrygrid-coordfunction-copyconstructor
23/66 Test #23: geometrygrid-coordfunction-copyconstructor ............ Passed 0.00 sec
Start 24: test-geogrid-yaspgrid
24/66 Test #24: test-geogrid-yaspgrid ................................. Passed 0.44 sec
Start 25: test-geogrid-uggrid
25/66 Test #25: test-geogrid-uggrid ................................... Passed 0.42 sec
Start 26: test-gridinfo
26/66 Test #26: test-gridinfo ......................................... Passed 0.41 sec
Start 27: test-identitygrid
27/66 Test #27: test-identitygrid ..................................... Passed 0.43 sec
Start 28: test-oned
28/66 Test #28: test-oned ............................................. Passed 0.01 sec
Start 29: test-mcmg-geogrid
29/66 Test #29: test-mcmg-geogrid ..................................... Passed 0.33 sec
Start 30: testiteratorranges
30/66 Test #30: testiteratorranges .................................... Passed 0.33 sec
Start 31: test-hierarchicsearch
31/66 Test #31: test-hierarchicsearch ................................. Passed 0.33 sec
Start 32: test-ug
32/66 Test #32: test-ug ............................................... Passed 0.78 sec
Start 33: test-parallel-ug
33/66 Test #33: test-parallel-ug ...................................... Passed 10.77 sec
Start 34: test-parallel-ug-mpi-2
34/66 Test #34: test-parallel-ug-mpi-2 ................................ Passed 8.13 sec
Start 35: test-loadbalancing
35/66 Test #35: test-loadbalancing ....................................***Skipped 0.00 sec
Start 36: issue-53-uggrid-intersections
36/66 Test #36: issue-53-uggrid-intersections ......................... Passed 0.37 sec
Start 37: test-alberta-1-1
37/66 Test #37: test-alberta-1-1 ...................................... Passed 0.01 sec
Start 38: test-alberta-1-2
38/66 Test #38: test-alberta-1-2 ...................................... Passed 0.01 sec
Start 39: test-alberta-2-2
39/66 Test #39: test-alberta-2-2 ...................................... Passed 0.11 sec
Start 40: test-alberta-1-3
40/66 Test #40: test-alberta-1-3 ...................................... Passed 0.01 sec
Start 41: test-alberta-2-3
41/66 Test #41: test-alberta-2-3 ...................................... Passed 1.25 sec
Start 42: test-alberta-3-3
42/66 Test #42: test-alberta-3-3 ...................................... Passed 1.39 sec
Start 43: test-yaspgrid-backuprestore-equidistant
43/66 Test #43: test-yaspgrid-backuprestore-equidistant ............... Passed 0.83 sec
Start 44: test-yaspgrid-backuprestore-equidistant-mpi-2
44/66 Test #44: test-yaspgrid-backuprestore-equidistant-mpi-2 ......... Passed 0.76 sec
Start 45: test-yaspgrid-backuprestore-equidistantoffset
45/66 Test #45: test-yaspgrid-backuprestore-equidistantoffset ......... Passed 0.82 sec
Start 46: test-yaspgrid-backuprestore-equidistantoffset-mpi-2
46/66 Test #46: test-yaspgrid-backuprestore-equidistantoffset-mpi-2 ... Passed 0.75 sec
Start 47: test-yaspgrid-backuprestore-tensor
47/66 Test #47: test-yaspgrid-backuprestore-tensor .................... Passed 0.82 sec
Start 48: test-yaspgrid-backuprestore-tensor-mpi-2
48/66 Test #48: test-yaspgrid-backuprestore-tensor-mpi-2 .............. Passed 0.72 sec
Start 49: test-yaspgrid-entityshifttable
49/66 Test #49: test-yaspgrid-entityshifttable ........................ Passed 0.00 sec
Start 50: test-yaspgrid-partitioner
50/66 Test #50: test-yaspgrid-partitioner ............................. Passed 0.33 sec
Start 51: test-yaspgrid-tensorgridfactory
51/66 Test #51: test-yaspgrid-tensorgridfactory ....................... Passed 0.32 sec
Start 52: test-yaspgrid-tensorgridfactory-mpi-2
52/66 Test #52: test-yaspgrid-tensorgridfactory-mpi-2 ................. Passed 0.32 sec
Start 53: test-yaspgrid-yaspfactory-1d
53/66 Test #53: test-yaspgrid-yaspfactory-1d .......................... Passed 0.33 sec
Start 54: test-yaspgrid-yaspfactory-1d-mpi-2
54/66 Test #54: test-yaspgrid-yaspfactory-1d-mpi-2 .................... Passed 0.33 sec
Start 55: test-yaspgrid-yaspfactory-2d
55/66 Test #55: test-yaspgrid-yaspfactory-2d .......................... Passed 0.51 sec
Start 56: test-yaspgrid-yaspfactory-2d-mpi-2
56/66 Test #56: test-yaspgrid-yaspfactory-2d-mpi-2 .................... Passed 0.52 sec
Start 57: test-yaspgrid-yaspfactory-3d
57/66 Test #57: test-yaspgrid-yaspfactory-3d .......................... Passed 2.02 sec
Start 58: test-yaspgrid-yaspfactory-3d-mpi-2
58/66 Test #58: test-yaspgrid-yaspfactory-3d-mpi-2 .................... Passed 1.56 sec
Start 59: test-yaspgrid-constructor
59/66 Test #59: test-yaspgrid-constructor ............................. Passed 0.33 sec
Start 60: globalindexsettest
60/66 Test #60: globalindexsettest .................................... Passed 0.33 sec
Start 61: persistentcontainertest
61/66 Test #61: persistentcontainertest ............................... Passed 0.33 sec
Start 62: structuredgridfactorytest
62/66 Test #62: structuredgridfactorytest ............................. Passed 0.36 sec
Start 63: tensorgridfactorytest
63/66 Test #63: tensorgridfactorytest ................................. Passed 11.70 sec
Start 64: vertexordertest
64/66 Test #64: vertexordertest ....................................... Passed 0.33 sec
Start 65: recipe-iterate-over-grid
65/66 Test #65: recipe-iterate-over-grid .............................. Passed 0.33 sec
Start 66: recipe-integration
66/66 Test #66: recipe-integration .................................... Passed 0.33 sec
95% tests passed, 3 tests failed out of 66
Total Test time (real) = 64.71 sec
The following tests did not run:
7 - printgridtest (Skipped)
35 - test-loadbalancing (Skipped)
The following tests FAILED:
8 - subsamplingvtktest (Failed)
9 - vtktest (Failed)
10 - vtktest-mpi-2 (Failed)
Errors while running CTest
======================================================================
Name: subsamplingvtktest
FullName: ./dune/grid/io/file/test/subsamplingvtktest
Status: FAILED
======================================================================
Name: vtktest
FullName: ./dune/grid/io/file/test/vtktest
Status: FAILED
======================================================================
Name: vtktest-mpi-2
FullName: ./dune/grid/io/file/test/vtktest-mpi-2
Status: FAILED
JUnit report for CTest results written to /<<PKGBUILDDIR>>/build/junit/cmake.xml
make[1]: *** [/usr/share/dune/dune-debian.mk:39: override_dh_auto_test] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:6: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
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| From | Santiago Vila <sanvila@debian.org> |
|---|---|
| Date | 2025-09-12 18:10 +0200 |
| Subject | Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed |
| Message-ID | <Luevv-eNJj-7@gated-at.bofh.it> |
| In reply to | #1261031 |
On Fri, Sep 12, 2025 at 04:58:33PM +0200, Markus Blatt wrote: > This is bug 1064762 that has now probably been added to bookworm by a patch > to vtk9. > > I can work around this here by simply deactivating test, but this kind of > reading of the vtk files I cannot fix here. dune-grid just writes those > files. > > The underlying problem can only be fixed in VTK. though. It might affect > other packes. > > How should we proceed? I think it all depends on much effort we[*] are willing to make. At this point in the life of bookworm (which is 2/3 of its supported period), there are already at least 60 different ftbfs bugs, so I would say that fixing the FTBFS problem alone (disabling the offending tests, if that's your plan and you know how to do it) would be more than acceptable and a lot better than nothing. [*] I say "we" because I'm also a team member, but I certainly can't fix all the issues and I definitely appreciate any kind of QA work that others might offer (like fixing ftbfs bugs in bookworm). Thanks.
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| From | Markus Blatt <markus@dr-blatt.de> |
|---|---|
| Date | 2025-09-15 16:00 +0200 |
| Subject | Bug#1114938: patch available for vtk9 in bookworm (was Re: Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed) |
| Message-ID | <LvhUl-fvMM-9@gated-at.bofh.it> |
| In reply to | #1261127 |
[Multipart message — attachments visible in raw view] — view raw
Hi, Am Fri, Sep 12, 2025 at 05:58:48PM +0200 schrieb Santiago Vila: >On Fri, Sep 12, 2025 at 04:58:33PM +0200, Markus Blatt wrote: > >> This is bug 1064762 that has now probably been added to bookworm by a patch >> to vtk9. >> >> I can work around this here by simply deactivating test, but this kind of >> reading of the vtk files I cannot fix here. dune-grid just writes those >> files. >> >> The underlying problem can only be fixed in VTK. though. It might affect >> other packes. >> >> How should we proceed? > >I think it all depends on much effort we[*] are willing to make. > >At this point in the life of bookworm (which is 2/3 of its supported >period), there are already at least 60 different ftbfs bugs, so I >would say that fixing the FTBFS problem alone (disabling the offending >tests, if that's your plan and you know how to do it) would be more >than acceptable and a lot better than nothing. > >[*] I say "we" because I'm also a team member, but I certainly can't >fix all the issues and I definitely appreciate any kind of QA work >that others might offer (like fixing ftbfs bugs in bookworm). > >Thanks. > As the problem appears also when trying to view vtk files in paraview, I opted to fix this in vtk. I did backport a fix that is already available in stable (to fix the same bug 1064762, see [1]) to bookworm. This fixes running the tests in dune-grid and will prevent users of other packages experiencing problems when dealing with vtk files containing raw data. I am only a maintainer of dune-grid and cannot upload the fixed package myself. You will find the fix in branch bookworm on salsa [2] (based on the latest bookworm release). I simply cherry-picked the previous fix to bookworm. For convenience the patch is also attached. I am reassigning this to vtk Best, Markus [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1064762 [2] https://salsa.debian.org/science-team/vtk9/-/tree/bookworm?ref_type=heads
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| From | Markus Blatt <markus@dr-blatt.de> |
|---|---|
| Date | 2025-09-15 18:10 +0200 |
| Subject | Bug#1114938: Change tag according to attached patch |
| Message-ID | <LvjW9-fxnj-3@gated-at.bofh.it> |
| In reply to | #1261031 |
Control: -1 +patch -ftbfs Control: -1 affects -1 src:dune-grid paraview Removing the ftbfs as this is now assigned to vtk9 (that probably misses tests checking parsing of vtk files with raw binary data). Please not that it produces an ftbfs in dune-grid as that tests parsing of those vtk files. It also affects the usage of paraview Markus
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| From | Dominique Belhachemi <domibel@debian.org> |
|---|---|
| Date | 2025-09-20 18:10 +0200 |
| Subject | Bug#1114938: patch available for vtk9 in bookworm (was Re: Bug#1114938: dune-grid: FTBFS in bookworm: Test #8: subsamplingvtktest ....................................***Failed) |
| Message-ID | <Lx8jU-gPy0-3@gated-at.bofh.it> |
| In reply to | #1261031 |
Paraview uses an embedded copy of VTK during the build, so your patch might not work as intended.
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| From | Drew Parsons <dparsons@debian.org> |
|---|---|
| Date | 2025-09-27 12:00 +0200 |
| Subject | Bug#1114938: vtk9 Fails to parse correct vtk files that contain raw binary data since security update to libexpat |
| Message-ID | <LzzSF-WsJ-15@gated-at.bofh.it> |
| In reply to | #1261031 |
Source: vtk9 Followup-For: Bug #1114938 X-Debbugs-Cc: Debian Security Team <team@security.debian.org> The issue with paraview's embedded copy of VTK is finally being resolved with paraview 6 and vtk 9.5, though that won't help bookworm. The patch being considered here for VTK looks more or less trivial, meaning it should be simple enough to apply it to both vtk and paraview in bookworm. The upstream patch is https://gitlab.kitware.com/vtk/vtk/-/commit/db8f9efca220c9d16a30958e179abae3379d0011
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