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Groups > linux.debian.bugs.dist > #1130326 > unrolled thread

Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials

Started bySebastian Ramacher <sramacher@debian.org>
First post2022-12-27 12:30 +0100
Last post2023-01-02 16:50 +0100
Articles 6 — 4 participants

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  Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Sebastian Ramacher <sramacher@debian.org> - 2022-12-27 12:30 +0100
    Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Anton Gladky <gladk@debian.org> - 2022-12-28 09:40 +0100
      Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Sebastian Ramacher <sramacher@debian.org> - 2022-12-31 14:30 +0100
        Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Anton Gladky <gladk@debian.org> - 2022-12-31 18:10 +0100
          Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Drew Parsons <dparsons@debian.org> - 2023-01-02 11:20 +0100
            Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials Graham Inggs <ginggs@debian.org> - 2023-01-02 16:50 +0100

#1130326 — Bug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials

FromSebastian Ramacher <sramacher@debian.org>
Date2022-12-27 12:30 +0100
SubjectBug#1025056: transition: numerical library transition: hypre / petsc / slepc / sundials
Message-ID<FHgjD-dByl-5@gated-at.bofh.it>
Hi Drew, hi Anton

On 2022-12-19 21:52:10 +0100, Sebastian Ramacher wrote:
> Hi Drew
> 
> On 2022-12-19 18:14:53 +0100, Drew Parsons wrote:
> > The hypre/petsc part of this transition is complete.
> > 
> > The sundials part is waiting for dyssol to be patched.  Anton is preparing
> > this.
> 
> sundials will also need fixes for #1026330 and #1026352.

Any news regarding sundials?

Cheers

> 
> Cheers
> 
> > 
> > Drew
> > 
> > 
> > On 2022-11-29 23:34, Sebastian Ramacher wrote:
> > > Control: tags -1 confirmed
> > > 
> > > Hi Drew
> > > 
> > > On 2022-11-29 12:16:55 +0100, Drew Parsons wrote:
> > > > Package: release.debian.org
> > > > Severity: normal
> > > > User: release.debian.org@packages.debian.org
> > > > Usertags: transition
> > > > X-Debbugs-Cc: Anton Gladky <gladk@debian.org>
> > > > 
> > > > We'd like to update the numerical library stack in time for the new
> > > > stable release.
> > > > 
> > > > Affected libraries are
> > > > 
> > > > hypre        2.25.0 -> 2.26.0
> > > > petsc/slepc    3.17 -> 3.18
> > > > sundials      5.8.0 -> 6.4.1
> > > > 
> > > > Autotransitions are already generated:
> > > > https://release.debian.org/transitions/html/auto-hypre.html
> > > > https://release.debian.org/transitions/html/auto-petsc.html
> > > > https://release.debian.org/transitions/html/auto-slepc.html
> > > > https://release.debian.org/transitions/html/auto-sundials.html
> > > > 
> > > > Most of the dependent packages are under our control
> > > > (Debian Science Team), octave is the main one outside our team.
> > > > 
> > > > Updates have built fine in experimental and dependent
> > > > packages are building successfully against them.
> > > > 
> > > > Anton Gladky will upload the sundials update.
> > > 
> > > Please go ahead
> > > 
> > > Cheers
> > 
> 
> -- 
> Sebastian Ramacher
> 

-- 
Sebastian Ramacher

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#1130464

FromAnton Gladky <gladk@debian.org>
Date2022-12-28 09:40 +0100
Message-ID<FHA8F-dPzq-3@gated-at.bofh.it>
In reply to#1130326
Hi Sebastian,

sundials is already in NEW, fixing two RC bugs.
Dyssol will be uploaded shortly.

Regards

Anton

Am Di., 27. Dez. 2022 um 12:23 Uhr schrieb Sebastian Ramacher
<sramacher@debian.org>:
>
> Hi Drew, hi Anton
>
> On 2022-12-19 21:52:10 +0100, Sebastian Ramacher wrote:
> > Hi Drew
> >
> > On 2022-12-19 18:14:53 +0100, Drew Parsons wrote:
> > > The hypre/petsc part of this transition is complete.
> > >
> > > The sundials part is waiting for dyssol to be patched.  Anton is preparing
> > > this.
> >
> > sundials will also need fixes for #1026330 and #1026352.
>
> Any news regarding sundials?
>
> Cheers
>
> >
> > Cheers
> >
> > >
> > > Drew
> > >
> > >
> > > On 2022-11-29 23:34, Sebastian Ramacher wrote:
> > > > Control: tags -1 confirmed
> > > >
> > > > Hi Drew
> > > >
> > > > On 2022-11-29 12:16:55 +0100, Drew Parsons wrote:
> > > > > Package: release.debian.org
> > > > > Severity: normal
> > > > > User: release.debian.org@packages.debian.org
> > > > > Usertags: transition
> > > > > X-Debbugs-Cc: Anton Gladky <gladk@debian.org>
> > > > >
> > > > > We'd like to update the numerical library stack in time for the new
> > > > > stable release.
> > > > >
> > > > > Affected libraries are
> > > > >
> > > > > hypre        2.25.0 -> 2.26.0
> > > > > petsc/slepc    3.17 -> 3.18
> > > > > sundials      5.8.0 -> 6.4.1
> > > > >
> > > > > Autotransitions are already generated:
> > > > > https://release.debian.org/transitions/html/auto-hypre.html
> > > > > https://release.debian.org/transitions/html/auto-petsc.html
> > > > > https://release.debian.org/transitions/html/auto-slepc.html
> > > > > https://release.debian.org/transitions/html/auto-sundials.html
> > > > >
> > > > > Most of the dependent packages are under our control
> > > > > (Debian Science Team), octave is the main one outside our team.
> > > > >
> > > > > Updates have built fine in experimental and dependent
> > > > > packages are building successfully against them.
> > > > >
> > > > > Anton Gladky will upload the sundials update.
> > > >
> > > > Please go ahead
> > > >
> > > > Cheers
> > >
> >
> > --
> > Sebastian Ramacher
> >
>
> --
> Sebastian Ramacher

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#1130935

FromSebastian Ramacher <sramacher@debian.org>
Date2022-12-31 14:30 +0100
Message-ID<FIK5X-eBfx-1@gated-at.bofh.it>
In reply to#1130464
Hi Anton

On 2022-12-28 09:30:00 +0100, Anton Gladky wrote:
> Hi Sebastian,
> 
> sundials is already in NEW, fixing two RC bugs.
> Dyssol will be uploaded shortly.

It's now in unstable. Please also fix #1027402.

Cheers

> 
> Regards
> 
> Anton
> 
> Am Di., 27. Dez. 2022 um 12:23 Uhr schrieb Sebastian Ramacher
> <sramacher@debian.org>:
> >
> > Hi Drew, hi Anton
> >
> > On 2022-12-19 21:52:10 +0100, Sebastian Ramacher wrote:
> > > Hi Drew
> > >
> > > On 2022-12-19 18:14:53 +0100, Drew Parsons wrote:
> > > > The hypre/petsc part of this transition is complete.
> > > >
> > > > The sundials part is waiting for dyssol to be patched.  Anton is preparing
> > > > this.
> > >
> > > sundials will also need fixes for #1026330 and #1026352.
> >
> > Any news regarding sundials?
> >
> > Cheers
> >
> > >
> > > Cheers
> > >
> > > >
> > > > Drew
> > > >
> > > >
> > > > On 2022-11-29 23:34, Sebastian Ramacher wrote:
> > > > > Control: tags -1 confirmed
> > > > >
> > > > > Hi Drew
> > > > >
> > > > > On 2022-11-29 12:16:55 +0100, Drew Parsons wrote:
> > > > > > Package: release.debian.org
> > > > > > Severity: normal
> > > > > > User: release.debian.org@packages.debian.org
> > > > > > Usertags: transition
> > > > > > X-Debbugs-Cc: Anton Gladky <gladk@debian.org>
> > > > > >
> > > > > > We'd like to update the numerical library stack in time for the new
> > > > > > stable release.
> > > > > >
> > > > > > Affected libraries are
> > > > > >
> > > > > > hypre        2.25.0 -> 2.26.0
> > > > > > petsc/slepc    3.17 -> 3.18
> > > > > > sundials      5.8.0 -> 6.4.1
> > > > > >
> > > > > > Autotransitions are already generated:
> > > > > > https://release.debian.org/transitions/html/auto-hypre.html
> > > > > > https://release.debian.org/transitions/html/auto-petsc.html
> > > > > > https://release.debian.org/transitions/html/auto-slepc.html
> > > > > > https://release.debian.org/transitions/html/auto-sundials.html
> > > > > >
> > > > > > Most of the dependent packages are under our control
> > > > > > (Debian Science Team), octave is the main one outside our team.
> > > > > >
> > > > > > Updates have built fine in experimental and dependent
> > > > > > packages are building successfully against them.
> > > > > >
> > > > > > Anton Gladky will upload the sundials update.
> > > > >
> > > > > Please go ahead
> > > > >
> > > > > Cheers
> > > >
> > >
> > > --
> > > Sebastian Ramacher
> > >
> >
> > --
> > Sebastian Ramacher
> 

-- 
Sebastian Ramacher

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#1130966

FromAnton Gladky <gladk@debian.org>
Date2022-12-31 18:10 +0100
Message-ID<FINwR-eDuU-7@gated-at.bofh.it>
In reply to#1130935
Hi Sebastian,

thanks for noting it! #1027402 is fixed now in unstable (that was wrong version
in Breaks+Replaces).

Regards

Anton

Am Sa., 31. Dez. 2022 um 14:20 Uhr schrieb Sebastian Ramacher
<sramacher@debian.org>:
>
> Hi Anton
>
> On 2022-12-28 09:30:00 +0100, Anton Gladky wrote:
> > Hi Sebastian,
> >
> > sundials is already in NEW, fixing two RC bugs.
> > Dyssol will be uploaded shortly.
>
> It's now in unstable. Please also fix #1027402.
>
> Cheers
>
> >
> > Regards
> >
> > Anton
> >
> > Am Di., 27. Dez. 2022 um 12:23 Uhr schrieb Sebastian Ramacher
> > <sramacher@debian.org>:
> > >
> > > Hi Drew, hi Anton
> > >
> > > On 2022-12-19 21:52:10 +0100, Sebastian Ramacher wrote:
> > > > Hi Drew
> > > >
> > > > On 2022-12-19 18:14:53 +0100, Drew Parsons wrote:
> > > > > The hypre/petsc part of this transition is complete.
> > > > >
> > > > > The sundials part is waiting for dyssol to be patched.  Anton is preparing
> > > > > this.
> > > >
> > > > sundials will also need fixes for #1026330 and #1026352.
> > >
> > > Any news regarding sundials?
> > >
> > > Cheers
> > >
> > > >
> > > > Cheers
> > > >
> > > > >
> > > > > Drew
> > > > >
> > > > >
> > > > > On 2022-11-29 23:34, Sebastian Ramacher wrote:
> > > > > > Control: tags -1 confirmed
> > > > > >
> > > > > > Hi Drew
> > > > > >
> > > > > > On 2022-11-29 12:16:55 +0100, Drew Parsons wrote:
> > > > > > > Package: release.debian.org
> > > > > > > Severity: normal
> > > > > > > User: release.debian.org@packages.debian.org
> > > > > > > Usertags: transition
> > > > > > > X-Debbugs-Cc: Anton Gladky <gladk@debian.org>
> > > > > > >
> > > > > > > We'd like to update the numerical library stack in time for the new
> > > > > > > stable release.
> > > > > > >
> > > > > > > Affected libraries are
> > > > > > >
> > > > > > > hypre        2.25.0 -> 2.26.0
> > > > > > > petsc/slepc    3.17 -> 3.18
> > > > > > > sundials      5.8.0 -> 6.4.1
> > > > > > >
> > > > > > > Autotransitions are already generated:
> > > > > > > https://release.debian.org/transitions/html/auto-hypre.html
> > > > > > > https://release.debian.org/transitions/html/auto-petsc.html
> > > > > > > https://release.debian.org/transitions/html/auto-slepc.html
> > > > > > > https://release.debian.org/transitions/html/auto-sundials.html
> > > > > > >
> > > > > > > Most of the dependent packages are under our control
> > > > > > > (Debian Science Team), octave is the main one outside our team.
> > > > > > >
> > > > > > > Updates have built fine in experimental and dependent
> > > > > > > packages are building successfully against them.
> > > > > > >
> > > > > > > Anton Gladky will upload the sundials update.
> > > > > >
> > > > > > Please go ahead
> > > > > >
> > > > > > Cheers
> > > > >
> > > >
> > > > --
> > > > Sebastian Ramacher
> > > >
> > >
> > > --
> > > Sebastian Ramacher
> >
>
> --
> Sebastian Ramacher

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#1131226

FromDrew Parsons <dparsons@debian.org>
Date2023-01-02 11:20 +0100
Message-ID<FJq5b-f2ml-9@gated-at.bofh.it>
In reply to#1130966
On 2022-12-31 17:59, Anton Gladky wrote:
> Hi Sebastian,
> 
> thanks for noting it! #1027402 is fixed now in unstable (that was wrong 
> version
> in Breaks+Replaces).
> 
> Am Sa., 31. Dez. 2022 um 14:20 Uhr schrieb Sebastian Ramacher
> <sramacher@debian.org>:
>> 
>> 
>> It's now in unstable. Please also fix #1027402.


Looks like deal.ii needs another binNMU against sundials 6.4.1+dfsg1-3 
to catch the new libsundials-nvecparallel-mpi6

Drew

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#1131287

FromGraham Inggs <ginggs@debian.org>
Date2023-01-02 16:50 +0100
Message-ID<FJvex-f5ox-11@gated-at.bofh.it>
In reply to#1131226
Hi Drew

On Mon, 2 Jan 2023 at 12:12, Drew Parsons <dparsons@debian.org> wrote:
> Looks like deal.ii needs another binNMU against sundials 6.4.1+dfsg1-3
> to catch the new libsundials-nvecparallel-mpi6

A binNMU was scheduled for 6.4.1+dfsg1-2 [1].

-3 shouldn't be relevant for building, however we hit a 'illegal
instruction' on the arm64 buildds.

Regards
Graham


[1] https://buildd.debian.org/status/package.php?p=deal.ii

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