Groups > linux.debian.bugs.dist > #1188861

Bug#1065333: q2-types: test data heavily outweighs actual code

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From	"Aaron M. Ucko" <ucko@debian.org>
Newsgroups	linux.debian.bugs.dist
Subject	Bug#1065333: q2-types: test data heavily outweighs actual code
Date	Sun, 03 Mar 2024 03:10:01 +0100
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Package: q2-types
Version: 2024.2.0-1
Severity: minor

The latest q2-types release increased its disk footprint from 800 kB or
so to nearly 52 MB.  AFAICT, the increase is largely due to the addition
of test data, most notably two 19.5+ MB eggnog.db files, a 6.6+ MB
eggnog.taxa.db.traverse.pkl accompanying one of them, and six ~720 kB
BAM files.  If these files are useful for testing the installation,
please split them off into a separate binary package that users can
install as desired; otherwise, please leave them out altogether.

Thanks!

-- System Information:
Debian Release: trixie/sid
  APT prefers testing-debug
  APT policy: (500, 'testing-debug'), (500, 'stable-security'), (500, 'stable-debug'), (500, 'proposed-updates-debug'), (500, 'oldstable-security'), (500, 'testing'), (300, 'unstable-debug'), (300, 'unstable')
Architecture: amd64 (x86_64)
Foreign Architectures: i386, x32

Kernel: Linux 6.6.13-amd64 (SMP w/8 CPU threads; PREEMPT)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages q2-types depends on:
ii  libopenblas0         0.3.26+ds-1
ii  python3              3.11.6-1
ii  python3-biom-format  2.1.15.2-3
ii  python3-h5py         3.9.0-5
ii  python3-ijson        3.2.3-1
hi  python3-numpy        1:1.23.5-2
ii  python3-pandas       1.5.3+dfsg-12
ii  python3-setuptools   68.1.2-2
ii  python3-skbio        0.5.9-4
ii  qiime                2024.2.0-1

q2-types recommends no packages.

q2-types suggests no packages.

-- no debconf information

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Bug#1065333: q2-types: test data heavily outweighs actual code "Aaron M. Ucko" <ucko@debian.org> - 2024-03-03 03:10 +0100

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