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Groups > linux.debian.maint.java > #10396

Bug#894359: Help needed to port beast2-mcmc to Java 9

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Hi,

I have pushed the latest upstream version including the proposed fix of
the Build-Depends to default-jdk to Git[1].  Unfortunately when trying
to build the package I get lots of errors, starting with:

...
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/XMLParserUtils.java:25: warning: CoreDocumentImpl is internal proprietary API and may be removed in a future release
    [javac] import com.sun.org.apache.xerces.internal.dom.CoreDocumentImpl;
    [javac]                                              ^
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/treeparser/NewickParser.java:4: error: package org.antlr.v4.runtime.dfa does not exist
    [javac] import org.antlr.v4.runtime.dfa.DFA;
    [javac]                                ^
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/TreeParser.java:38: error: package org.antlr.v4.runtime.misc does not exist
    [javac] import org.antlr.v4.runtime.misc.NotNull;
    [javac]                                 ^
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/TreeParser.java:39: error: package org.antlr.v4.runtime.tree does not exist
    [javac] import org.antlr.v4.runtime.tree.ParseTree;
    [javac]                                 ^
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/treeparser/NewickParser.java:13: error: cannot find symbol
    [javac] public class NewickParser extends Parser {
    [javac]                                   ^
    [javac]   symbol: class Parser
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/treeparser/NewickParser.java:16: error: cannot find symbol
    [javac] <-->protected static final DFA[] _decisionToDFA;
    [javac] <-->                       ^
    [javac]   symbol:   class DFA
    [javac]   location: class NewickParser
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/treeparser/NewickParser.java:17: error: cannot find symbol
    [javac] <-->protected static final PredictionContextCache _sharedContextCache =
    [javac] <-->                       ^
    [javac]   symbol:   class PredictionContextCache
    [javac]   location: class NewickParser
    [javac] /build/beast2-mcmc-2.4.8+dfsg/src/beast/util/treeparser/NewickParser.java:42: error: cannot find symbol
    [javac] <-->public static final Vocabulary VOCABULARY = new VocabularyImpl(_LITERAL_NAMES, _SYMBOLIC_NAMES);
    [javac] <-->                    ^
    [javac]   symbol:   class Vocabulary
    [javac]   location: class NewickParser
...


I admit I do not have the slightest idea what to do next. :-(

Any help would be appreciated

    Andreas.


[1] https://salsa.debian.org/med-team/beast2-mcmc

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http://fam-tille.de

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Bug#894359: Help needed to port beast2-mcmc to Java 9 Andreas Tille <andreas@an3as.eu> - 2018-04-06 09:40 +0200
  Re: Help needed to port beast2-mcmc to Java 9 Andreas Tille <andreas@an3as.eu> - 2018-04-06 13:50 +0200
    Re: Help needed to port beast2-mcmc to Java 9 Emmanuel Bourg <ebourg@apache.org> - 2018-04-06 14:00 +0200
      Re: Help needed to port beast2-mcmc to Java 9 Andreas Tille <andreas@an3as.eu> - 2018-04-09 13:30 +0200

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