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Groups > linux.debian.maint.java > #8598

Hopefully final problems with maven rules (Re: Continuing work on qualimap)

From Andreas Tille <andreas@an3as.eu>
Newsgroups linux.debian.maint.java
Subject Hopefully final problems with maven rules (Re: Continuing work on qualimap)
Date 2015-11-26 09:00 +0100
Message-ID <qyZDe-1YS-35@gated-at.bofh.it> (permalink)
References (3 earlier) <qylFM-9v-23@gated-at.bofh.it> <qylFM-9v-25@gated-at.bofh.it> <qylFM-9v-27@gated-at.bofh.it> <qylFM-9v-15@gated-at.bofh.it> <qylPs-cQ-23@gated-at.bofh.it>
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Hi,

thanks to all your hints I made some progress.  Also libejml-java is accepted
so all preconditions should be fulfilled.  Unfortunately this build error remains
in qualimap[1]:

NOTE: Maven is executing in offline mode. Any artifacts not already in your local
repository will be inaccessible.

[INFO] Scanning for projects...
[INFO] Searching repository for plugin with prefix: 'install'.
[INFO] ------------------------------------------------------------------------
[INFO] Building qualimap
[INFO]    task-segment: [install:install-file] (aggregator-style)
[INFO] ------------------------------------------------------------------------
[INFO] [install:install-file {execution: default-cli}]
[INFO] pom.xml not found in sam.jar
[INFO] ------------------------------------------------------------------------
[ERROR] BUILD ERROR
[INFO] ------------------------------------------------------------------------
[INFO] The artifact information is incomplete or not valid:
  [0]  'groupId' with value 'net/sf' does not match a valid id pattern.

[INFO] ------------------------------------------------------------------------
[INFO] For more information, run Maven with the -e switch
[INFO] ------------------------------------------------------------------------


The problem might be that there are two directories in sam.jar and I
have no good idea which one to use as groupId.  I assumed net/sf would
be the right one - but either this is not the case or I did something
else wrong.

BTW, is there any chance to provide a maven control file for libsam-java
(and others).  IMHO, it would be better to fix those things at the source
rather than in all packages using it.

Thanks for any help

       Andreas.


[1] git://anonscm.debian.org/debian-med/qualimap.git

-- 
http://fam-tille.de

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Thread

Continuing work on qualimap (Was: Any help?) Andreas Tille <andreas@an3as.eu> - 2015-11-24 14:20 +0100
  Re: Continuing work on qualimap (Was: Any help?) Emmanuel Bourg <ebourg@apache.org> - 2015-11-24 14:30 +0100
    Re: Continuing work on qualimap (Was: Any help?) Andreas Tille <andreas@an3as.eu> - 2015-11-24 15:50 +0100
      Re: Continuing work on qualimap Bas Couwenberg <sebastic@xs4all.nl> - 2015-11-24 16:00 +0100
        Re: Continuing work on qualimap Emmanuel Bourg <ebourg@apache.org> - 2015-11-24 16:10 +0100
    Hopefully final problems with maven rules (Re: Continuing work on  qualimap) Andreas Tille <andreas@an3as.eu> - 2015-11-26 09:00 +0100
      Re: Hopefully final problems with maven rules (Re: Continuing work on  qualimap) Sebastiaan Couwenberg <sebastic@xs4all.nl> - 2015-11-26 09:10 +0100
      Re: Hopefully final problems with maven rules (Re: Continuing work on  qualimap) Emmanuel Bourg <ebourg@apache.org> - 2015-11-26 09:20 +0100
        Providing Maven input files for picard-tools (Was: Hopefully final  problems with maven rules) Andreas Tille <andreas@an3as.eu> - 2015-11-26 12:00 +0100
          Re: Providing Maven input files for picard-tools (Was: Hopefully  final problems with maven rules) Vincent Danjean <vdanjean@debian.org> - 2015-11-26 12:50 +0100
        How to obtain sources for org.bioinfo? (Was: Hopefully final  problems with maven rules) Andreas Tille <andreas@an3as.eu> - 2015-11-26 19:30 +0100

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