Path: csiph.com!news.redatomik.org!aioe.org!bofh.it!news.nic.it!robomod From: Andreas Tille Newsgroups: linux.debian.maint.python,linux.debian.bugs.dist Subject: Re: foo FTBFS with dh-python >= 3.20180313 Date: Mon, 30 Apr 2018 14:30:01 +0200 Message-ID: References: X-Original-To: debian-python@lists.debian.org X-Mailbox-Line: From debian-python-request@lists.debian.org Mon Apr 30 12:28:39 2018 Old-Return-Path: X-Amavis-Spam-Status: No, score=-5 tagged_above=-10000 required=5.3 tests=[BAYES_00=-2, LDO_WHITELIST=-5, MEDS2=2, RCVD_IN_DNSWL_NONE=-0.0001] autolearn=no autolearn_force=no X-Policyd-Weight: using cached result; rate: -6.1 MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Disposition: inline Content-Transfer-Encoding: 8bit User-Agent: NeoMutt/20170113 (1.7.2) X-Mailing-List: archive/latest/15891 List-ID: List-URL: List-Archive: https://lists.debian.org/msgid-search/20180430122823.xth6am67pvxkrzxx@an3as.eu Approved: robomod@news.nic.it Lines: 36 Organization: linux.* mail to news gateway Sender: robomod@news.nic.it X-Original-Cc: 894213@bugs.debian.org X-Original-Date: Mon, 30 Apr 2018 14:28:23 +0200 X-Original-Message-ID: <20180430122823.xth6am67pvxkrzxx@an3as.eu> X-Original-References: <20180426094152.lxnmpce34f3yrtdf@an3as.eu> <20180426100117.km5zao3pr7oftnir@sar0.p1otr.com> Xref: csiph.com linux.debian.maint.python:10487 linux.debian.bugs.dist:895234 Hi Piotr, On Thu, Apr 26, 2018 at 12:01:17PM +0200, Piotr Ożarowski wrote: > [Andreas Tille, 2018-04-26] > > ModuleNotFoundError: No module named 'skbio' > > that's because I had to change pybuild's internal paths (to make it work > with multiple modules/packages at the same time). > > I added --print option for those who really need it (f.e. while > building sphinx docs) - please use it instead of hardcoding pybuild's > internal paths. > > You can use it like this: > > PYTHONPATH=$(shell pybuild --print build_dir --interpreter python3) ... This worked nicely for python-skbio. > I fixed few packages already, here's a list of other affected ones: > ... > snakemake Debian Med Packaging Team I tried the same trick for snakemake in Git[1] but failed. Am I missing something? Kind regards Andreas. [1] https://salsa.debian.org/med-team/snakemake -- http://fam-tille.de