Path: csiph.com!feeder.erje.net!2.eu.feeder.erje.net!news2.arglkargh.de!news.mixmin.net!aioe.org!bofh.it!news.nic.it!robomod From: Andreas Tille Newsgroups: linux.debian.maint.python Subject: Re: Strange encoding problem in setup.py of biopython 1.71 Date: Fri, 06 Apr 2018 09:20:01 +0200 Message-ID: References: X-Mailbox-Line: From debian-python-request@lists.debian.org Fri Apr 6 07:16:37 2018 Old-Return-Path: X-Amavis-Spam-Status: No, score=-6.98 tagged_above=-10000 required=5.3 tests=[BAYES_00=-2, DIGITS_LETTERS=1, LDO_WHITELIST=-5, MD5_SHA1_SUM=-1, MURPHY_DRUGS_REL8=0.02] autolearn=ham autolearn_force=no X-Policyd-Weight: NOT_IN_SBL_XBL_SPAMHAUS=-1.5 NOT_IN_BL_NJABL=-1.5 CL_IP_EQ_HELO_IP=-2 (check from: .debian. - helo: .mail.an3as. - helo-domain: .an3as.) FROM/MX_MATCHES_NOT_HELO(DOMAIN)=0; rate: -5 MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline User-Agent: NeoMutt/20170113 (1.7.2) X-Mailing-List: archive/latest/15796 List-ID: List-URL: List-Archive: https://lists.debian.org/msgid-search/20180406071620.ngdzjtvqs3a4ev7m@an3as.eu Approved: robomod@news.nic.it Lines: 24 Organization: linux.* mail to news gateway Sender: robomod@news.nic.it X-Original-Cc: debian-python@lists.debian.org X-Original-Date: Fri, 6 Apr 2018 09:16:20 +0200 X-Original-Message-ID: <20180406071620.ngdzjtvqs3a4ev7m@an3as.eu> X-Original-References: <20180405141056.nsmfcwdingnmgx5d@an3as.eu> <20180405143432.xrnte6hyft7rf2vm@an3as.eu> <1eb7f5a5-711a-8dc6-a376-e4a6fd298991@gmx.de> Xref: csiph.com linux.debian.maint.python:10396 Hi Peter, On Thu, Apr 05, 2018 at 04:19:50PM +0100, Peter Cock wrote: > > https://github.com/biopython/biopython/commit/6421d365a511c0de71748737ba6e1cd8518658ac > > Can you pull in that commit as a patch for the Biopython 1.71 package? Thanks. I'm using this as patch. I can confirm that this works now (I'm using the other patch suggested here[1] in addition to deal with potential other encoding issues. I'll upload soon (I had some other issues with the packaging which are not related). Kind regards Andreas. [1] https://lists.debian.org/debian-python/2018/04/msg00023.html -- http://fam-tille.de