Path: csiph.com!xmission!news.snarked.org!news.linkpendium.com!news.linkpendium.com!panix!not-for-mail From: vjp2.at@at.BioStrategist.dot.dot.com Newsgroups: comp.lang.java.programmer Subject: Re: Java Jython RDKit, some progress, still confused Date: Thu, 16 Jul 2020 16:32:37 +0000 (UTC) Organization: Samani Marions Panyaught NYC-11357-3436-287-USA Lines: 47 Message-ID: References: NNTP-Posting-Host: panix1.panix.com X-Trace: reader1.panix.com 1594917157 21112 166.84.1.1 (16 Jul 2020 16:32:37 GMT) X-Complaints-To: abuse@panix.com NNTP-Posting-Date: Thu, 16 Jul 2020 16:32:37 +0000 (UTC) User-Agent: tin/2.4.4-20191224 ("Millburn") (NetBSD/9.0 (amd64)) Xref: csiph.com comp.lang.java.programmer:39567 I'm really tired of this, so I can see why others might be too. Profue apologise and many thanks for your patience. But I broke it down to defined files.dirs, dir dir lists of them to be sure they weren't typos. THe rror messages are not all for this version, I just accumulated them and I fully expect them to reappear ('.`) @echo off SET RD_HOME=. SET JAVA_HOME=..\CommonFiles\JAVA SET JAVA_COMMAND=%JAVA_HOME%\bin\java.exe SET rdk=%RD_HOME%\rdkit-master\Code\JavaWrappers\gmwrapper\org.RDKit.jar set jyt="%JAVA_HOME%"\bin\jython-standalone-2.5.4-rc1.jar.jar set jlp="%RD_HOME%"\rdkit-master\Code\JavaWrappers\gmwrapper rem -verbose:class "%JAVA_COMMAND%" -Xmx256m -classpath "%rdk%;%jyt%" -Djava.library.path=%jlp% | more pause rem Loaded java.lang.Shutdown lib\rt.jar rem from java import lang works only if preceded by from java.lang import * rem ImportError: No module named RKDit rem java.lang.NoClassDefFoundError java.lang.ClassNotFoundException: org.RDKit.jar Could not find the main class: rem The system cannot find the path specified. '-Djava.library.path' is not recognized as rem help() ImportError: No module named pydoc rem | "%RD_HOME%"\rdkit.py :END - = - Vasos Panagiotopoulos, Columbia'81+, Reagan, Mozart, Pindus blog: panix.com/~vjp2/ruminatn.htm - = - web: panix.com/~vjp2/vasos.htm facebook.com/vasjpan2 - linkedin.com/in/vasjpan02 - biostrategist.com ---{Nothing herein constitutes advice. Everything fully disclaimed.}---