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From: vjp2.at@at.BioStrategist.dot.dot.com
Newsgroups: comp.lang.java.programmer
Subject: Re: What's wrong with this Java Jython call?
Date: Sat, 13 Jun 2020 11:15:11 +0000 (UTC)
Organization: Samani Marions Panyaught NYC-11357-3436-287-USA
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First, many thanks.

Here's where I am.
1. Is the ";jython" correct?
2. I added -jar to run jython alone
3. the "wrappers" are files with extension .i
4. I posted a question on the RDKIT sourceforce list, no reply
5. Yes, I removed the script, but how do I use it to init then return to
      prompt? TEE? |?

Thanks again

@echo off
SET RD_HOME=.
SET JAVA_HOME=..\CommonFiles\JAVA
SET JAVA_COMMAND=%JAVA_HOME%\bin\java.exe
SET LOCAL_CLASSPATH=%RD_HOME%\org.RDKit.jar
"%JAVA_COMMAND%" -classpath "%LOCAL_CLASSPATH%"  -jar "%JAVA_HOME%"\jython-standalone-2.5.jar; jython -Djava.library.path="%RD_HOME%"\rdkit-master\Code\JavaWrappers\gmwrapper  
rem if remove semicolon complains jython not found in rdkit - of course it's in common
rem able to run jython as jar run print "hello" or print 3+4
rem some docs have rdkit.jar in gmwrapper; what are dlls but no exe doing here?
pause
rem < "%RD_HOME%"\start.rdk 
rem how can I run this and return to prompt?
:END

rem these are in start.rdk
rem from org.RDKit import *
rem from java import lang
rem lang.System.loadLibrary('GraphMolWrap')
rem m = RWMol.MolFromSmiles('c1ccccc1')
rem m.getNumAtoms()
6L


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