Path: csiph.com!1.us.feeder.erje.net!2.eu.feeder.erje.net!feeder.erje.net!news-2.dfn.de!news.dfn.de!fu-berlin.de!bofh.it!news.nic.it!robomod From: Drew Parsons Newsgroups: linux.debian.bugs.dist,linux.debian.maint.python Subject: Bug#1043240: pandas 1.5 -> 2.1? Date: Mon, 11 Dec 2023 00:40:01 +0100 Message-ID: References: X-Original-To: "Kingsley G. Morse Jr." X-Mailbox-Line: From debian-bugs-dist-request@lists.debian.org Sun Dec 10 23:33:09 2023 Old-Return-Path: X-Spam-Flag: NO X-Spam-Score: -4.21 Reply-To: dparsons@debian.org, 1043240@bugs.debian.org Resent-To: debian-bugs-dist@lists.debian.org Resent-Cc: Debian Science Team X-Debian-Pr-Message: followup 1043240 X-Debian-Pr-Package: python3-pandas X-Debian-Pr-Source: pandas MIME-Version: 1.0 Mail-Reply-To: dparsons@debian.org X-Sender: dparsons@debian.org Organization: The Debian Project Content-Type: text/plain; charset=US-ASCII; format=flowed Content-Transfer-Encoding: 7bit X-Gnd-Sasl: webmail@emerall.com X-Debian-Message: from BTS X-Mailing-List: archive/latest/1810211 List-ID: List-URL: Approved: robomod@news.nic.it Lines: 19 Sender: robomod@news.nic.it X-Original-Cc: 1043240@bugs.debian.org, Debian Science List , Debian Med Project List , debian-python@lists.debian.org X-Original-Date: Mon, 11 Dec 2023 00:30:54 +0100 X-Original-Message-ID: X-Original-References: <7e60a0ee-b7e0-4905-b8f7-78e602f3a4ac@zoho.com> <0ed32aff-e490-54ec-5890-9c10ca1e76bd@zoho.com> Xref: csiph.com linux.debian.bugs.dist:1178057 linux.debian.maint.python:15342 On 2023-12-10 21:55, Kingsley G. Morse Jr. wrote: > Hi Rebecca, Julian and all science minded pythonistas of debian, great > and small! > > > 3.) The following one-liner suggests 44 debian > packages might be affected by the breaks > Rebecca said would be caused by pandas 2.x: > > $ for s in augur cnvkit dyda emperor esda mirtop pymatgen pyranges > python-anndata python-biom-format python-cooler python-nanoget > python-skbio python-ulmo q2-quality-control q2-demux q2-taxa q2-types > q2templates sklearn-pandas ; do apt-cache search "$s" ; done | less I'd say don't worry about pymatgen in any case. It's got a new version to upgrade to, and they make regular releases. Drew