Path: csiph.com!eternal-september.org!feeder.eternal-september.org!aioe.org!bofh.it!news.nic.it!robomod From: Emmanuel Bourg Newsgroups: linux.debian.maint.java Subject: Re: Help needed for gatk Date: Thu, 21 Jan 2016 10:30:02 +0100 Message-ID: References: X-Original-To: Debian Java List , Debian Med Packaging Team X-Mailbox-Line: From debian-java-request@lists.debian.org Thu Jan 21 09:27:21 2016 Old-Return-Path: X-Amavis-Spam-Status: No, score=-7.448 tagged_above=-10000 required=5.3 tests=[BAYES_00=-2, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, FREEMAIL_FORGED_FROMDOMAIN=0.25, FREEMAIL_FROM=0.001, HEADER_FROM_DIFFERENT_DOMAINS=0.001, LDO_WHITELIST=-5, RCVD_IN_DNSWL_LOW=-0.7] autolearn=ham autolearn_force=no X-Policyd-Weight: using cached result; rate: -7 Dkim-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=sender:subject:references:to:from:message-id:date:user-agent :mime-version:in-reply-to:content-type:content-transfer-encoding; bh=CSS5xRWEesZiR2t0RvH/Pd5OMEc/1H9L341a73X5mLM=; b=WQOXVCRda6UiqNI1bNqS9FO2LrK6nqa1MAl15tei5SNJ/ZBo8EjKlX2c5ZRtbCb8dL 5MmsQetB6IfW9kBG98crINiV+QQM/RO6kb0qlXQwqYnfHu1eW3xDg2GZdiF7yIoKt+xQ TFLxl5sR5T3E9icDCZCt/AD95pKAqayG4v+VmBH0AD8XlqeCx768Wo9FzlP16EoxrbvW QzNTaPYuOJ+Syj8zCUmXFrR/X1pwtBqDmxpyWSAujca8CWk87I2+VCZhdW/b4VSgIX1J IJ0BQqlc7BFgWiIu7hA63tgB4c3/0d5OlwvumUE76CfzTS2hmuRcy4ptRcut+TwjxD/Q FldA== X-Google-Dkim-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20130820; h=x-gm-message-state:sender:subject:references:to:from:message-id :date:user-agent:mime-version:in-reply-to:content-type :content-transfer-encoding; bh=CSS5xRWEesZiR2t0RvH/Pd5OMEc/1H9L341a73X5mLM=; b=Cwl7cWBKxcZ7CLTfB+hLsoiG0hYzJJSwz2FEPAf2HBbRcOdhSgaKuS8ILHqiJXMBrw Xj3vS8+y1AWFeh64onyj4gh7kkFtPSIzFidmXZTlFuSMFPs0lo5fXwMai8Cnihd5/KH8 Iq84PevLGInJIPomxRyDnsVOLpMtNvdcHNrqyYO6xhgUEDRv57ykkDvZnr2NfJGM75Q5 Bv8SJtpV1cPu5G4yee9mAQsBv1DyEYEN+f64B2Zs03ts+P6vzP3+E97GXOAK5Qq6OwhH MtjemIoMpnoPttH+osFNsso7zeGQ9UVmAqCirkJLYS6ERQZtB7+9UtBZDi3zdst1HAAX RgyA== X-Gm-Message-State: AG10YORqSCwkMYMj+44dxBzVfxnxYK23+gDWZHTjqenCseX3tnETRdSIqBCqlubL8cGjHw== X-Received: by 10.194.232.166 with SMTP id tp6mr3732243wjc.36.1453368425517; Thu, 21 Jan 2016 01:27:05 -0800 (PST) Sender: robomod@news.nic.it User-Agent: Mozilla/5.0 (Windows NT 6.1; WOW64; rv:38.0) Gecko/20100101 Thunderbird/38.5.1 MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 7bit X-Mailing-List: archive/latest/19059 List-ID: List-URL: List-Archive: https://lists.debian.org/msgid-search/56A0A467.8000207@apache.org Approved: robomod@news.nic.it Lines: 6 Organization: linux.* mail to news gateway X-Original-Date: Thu, 21 Jan 2016 10:27:03 +0100 X-Original-Message-ID: <56A0A467.8000207@apache.org> X-Original-References: <20160121084856.GG21410@an3as.eu> <20160121090248.GI21410@an3as.eu> X-Original-Sender: Emmanuel Bourg Xref: csiph.com linux.debian.maint.java:8739 I don't think the unversionned plugins are the issue, this works fine usually. This is more likely to be caused by missing plugins or dependencies. maven-scala-plugin and maven-junction-plugin are missing for example. Emmanuel Bourg