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Date: Thu, 17 Nov 2011 02:12:09 -0800
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Subject: Re: problem in running script file (model-default.py)
From: Chris Rebert <clp2@rebertia.com>
To: Anushree Tripathi <anushritripathi@gmail.com>
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On Thu, Nov 17, 2011 at 1:51 AM, Anushree Tripathi
<anushritripathi@gmail.com> wrote:
> When I run script file(i.e.,model-default.py) on IDLE interface,I m
> getting=C2=A0this error:
> read_al_373E> Protein specified in ALIGN_CODES(i) was not found in the
> alignment file; ALIGN_CODES(=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0=C2=A0 1) =3D=
=C2=A0 2hyd

Such an error is entirely specific to the particular script you are
running (and/or possibly due to a lack of command-line arguments since
you're running it via IDLE).
Either consult the script's documentation or author, or post the
script here. We can't debug/troubleshoot code we don't have access to.

Regards,
Chris