Path: csiph.com!fu-berlin.de!uni-berlin.de!not-for-mail From: Oscar Benjamin Newsgroups: comp.lang.python Subject: Re: 3D numpy array subset Date: Wed, 9 Dec 2015 20:20:20 +0000 Lines: 24 Message-ID: References: <2e1a80e9-cd0a-46b5-a8c0-97f208f71f54@googlegroups.com> Mime-Version: 1.0 Content-Type: text/plain; charset=UTF-8 X-Trace: news.uni-berlin.de /5l/CWXijQNfwbge1AVD1w/Nbvs3g5ZfQeygh9CiFmfA== Return-Path: X-Original-To: python-list@python.org Delivered-To: python-list@mail.python.org X-Spam-Status: OK 0.008 X-Spam-Evidence: '*H*': 0.98; '*S*': 0.00; 'indices': 0.07; 'cc:addr :python-list': 0.09; '14:26,': 0.16; 'arrays.': 0.16; 'cc:name:python list': 0.16; 'datasets': 0.16; 'intersection': 0.16; 'numpy': 0.16; 'received:io': 0.16; 'received:psf.io': 0.16; 'subject:array': 0.16; 'wrote:': 0.16; '>': 0.18; 'email addr:gmail.com>': 0.18; 'all,': 0.20; '2015': 0.20; 'cc:2**0': 0.20; 'cc:addr:python.org': 0.20; 'arrays': 0.22; 'file.': 0.22; 'dec': 0.23; 'elements': 0.23; 'header:In-Reply-To:1': 0.24; 'message-id:@mail.gmail.com': 0.27; 'function': 0.28; 'finds': 0.29; 'subset': 0.29; 'array': 0.29; "i'm": 0.30; 'another': 0.32; 'common': 0.33; 'definition': 0.34; 'file': 0.34; 'received:google.com': 0.35; 'so,': 0.35; 'clear': 0.35; 'something': 0.35; 'but': 0.36; 'there': 0.36; 'url:org': 0.36; 'received:209.85': 0.36; 'subject:: ': 0.37; 'two': 0.37; 'skip:& 10': 0.37; 'received:209': 0.38; 'mean': 0.38; 'sure': 0.39; 'does': 0.39; 'dear': 0.67; 'oscar': 0.84; 'url:scipy': 0.84; 'url:reference': 0.91 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:in-reply-to:references:date:message-id:subject:from:to :cc:content-type; bh=vaF8uFZstQMF1SlseBReo4ZTCgy5GkW+/RN3cUH3JLc=; b=Q2GMCQFv9TtoRru0HRGgKbobnopNEI1XwBL4KdAbGzxuhQr5koq/rl/dZUyk0YchZA E09TDaFuEpf4W4vVMEtU6zNi9KaP75lVUz7WfC0T5yp4WdayAxMDg9g7qnFw+DI6aO1t UAksAM3b8IBivzChw+ThbB2E5Q05r4v7isxLFSyQ2tU5fjrj2/9HNgdG6h7UtOSaQroY D9dXDuuuMBetsaTraeCksolbh+6Z3hjs4xNuI5WEUBkM3LPpR/FqoXRWA3RQeMPi+iqO WVVQBjPR9xC6KeL5qzU1tqXMN65MmrfJgodcSby9vtBmstlIJBb5i+fZa5eHBhwc7em/ dp5w== X-Received: by 10.112.151.67 with SMTP id uo3mr2828481lbb.43.1449692420484; Wed, 09 Dec 2015 12:20:20 -0800 (PST) In-Reply-To: <2e1a80e9-cd0a-46b5-a8c0-97f208f71f54@googlegroups.com> X-Content-Filtered-By: Mailman/MimeDel 2.1.20+ X-BeenThere: python-list@python.org X-Mailman-Version: 2.1.20+ Precedence: list List-Id: General discussion list for the Python programming language List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Xref: csiph.com comp.lang.python:100209 On 9 Dec 2015 14:26, "Heli" wrote: > > Dear all, > > I am reading a dataset from a HDF5 file using h5py. my datasets are 3D. > > Then I will need to check if another 3d numpy array is a subset of this 3D array i am reading from the file. > > In general, is there any way to check if two 3d numpy arrays have intersections and if so, get the indices of the intersection area. > > By intersection, I exactly mean the intersection definition used in set theory. Does this help: http://docs.scipy.org/doc/numpy/reference/generated/numpy.intersect1d.html I'm not sure how the 3d part is relevant but that function finds the common elements of two arrays. Use .flat or something to make the 3d arrays be treated as 1d. Otherwise it's not clear what you mean by intersection. -- Oscar