Path: csiph.com!news.swapon.de!fu-berlin.de!uni-berlin.de!individual.net!not-for-mail From: Tom P Newsgroups: comp.lang.python Subject: Re: problem with netCDF4 OpenDAP Date: Fri, 14 Aug 2015 09:18:54 +0200 Lines: 65 Message-ID: References: Mime-Version: 1.0 Content-Type: text/plain; charset=utf-8; format=flowed Content-Transfer-Encoding: 8bit X-Trace: individual.net MebVRWUWr16cvXeyaqZZ7wyiVbDrS/1dRHHq68ljUweu3F2mo= Cancel-Lock: sha1:lPFIVIUF2TPyz2PCxI5/aQciW2c= User-Agent: Mozilla/5.0 (X11; Linux x86_64; rv:31.0) Gecko/20100101 Thunderbird/31.8.0 In-Reply-To: Xref: csiph.com comp.lang.python:95373 On 08/13/2015 05:55 PM, Jason Swails wrote: > > > On Thu, Aug 13, 2015 at 6:32 AM, Tom P > wrote: > > I'm having a problem trying to access OpenDAP files using netCDF4. > The netCDF4 is installed from the Anaconda package. According to > their changelog, openDAP is supposed to be supported. > > netCDF4.__version__ > Out[7]: > '1.1.8' > > Here's some code: > > url = > 'http://www1.ncdc.noaa.gov/pub/data/cmb/ersst/v3b/netcdf/ersst.201507.nc' > nc = netCDF4.Dataset(url) > > I get the error - > netCDF4/_netCDF4.pyx in netCDF4._netCDF4.Dataset.__init__ > (netCDF4/_netCDF4.c:9551)() > > RuntimeError: NetCDF: file not found > > > However if I download the same file, it works - > url = '/home/tom/Downloads/ersst.201507.nc ' > nc = netCDF4.Dataset(url) > print nc > . . . . > > Is it something I'm doing wrong? > > > ​Yes. URLs are not files and cannot be opened like normal files. > netCDF4 *requires* a local file as far as I can tell. > > All the best, > Jason > > -- > Jason M. Swails > BioMaPS, > Rutgers University > Postdoctoral Researcher Thanks for the reply but that is not what the documentation says. http://unidata.github.io/netcdf4-python/#section8 "Remote OPeNDAP-hosted datasets can be accessed for reading over http if a URL is provided to the netCDF4.Dataset constructor instead of a filename. However, this requires that the netCDF library be built with OPenDAP support, via the --enable-dap configure option (added in version 4.0.1)." and for the Anaconda package - http://docs.continuum.io/anaconda/changelog "2013-05-08: 1.5.0: Highlights: updates to all important packages: python, numpy, scipy, ipython, matplotlib, pandas, cython added netCDF4 (with OpenDAP support) on Linux and MacOSX"